Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:10569352..10571192-chr11:10591337..10594037,2	K562	blood:
2	chr11:10560841..10564644-chr11:10570960..10574238,3	K562	blood:

Variant related genes	Relation type
ENSG00000110315	Chromatin interaction
ENSG00000177112	Chromatin interaction

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10500728	0.90[EUR][1000 genomes]
rs11821864	1.00[EUR][1000 genomes]
rs12099382	0.90[EUR][1000 genomes]
rs16907959	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2403331	0.90[EUR][1000 genomes]
rs55637826	1.00[EUR][1000 genomes]
rs55657367	0.90[EUR][1000 genomes]
rs55676441	0.90[EUR][1000 genomes]
rs55897150	0.90[EUR][1000 genomes]
rs56070854	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72859111	0.90[EUR][1000 genomes]
rs72859115	0.90[EUR][1000 genomes]
rs72859152	0.90[EUR][1000 genomes]
rs72859180	0.90[EUR][1000 genomes]
rs72859181	0.90[EUR][1000 genomes]
rs72859188	0.90[EUR][1000 genomes]
rs72859201	0.90[EUR][1000 genomes]
rs72861010	1.00[EUR][1000 genomes]
rs72861016	1.00[EUR][1000 genomes]
rs72861030	1.00[EUR][1000 genomes]
rs72861037	1.00[EUR][1000 genomes]
rs72861047	1.00[EUR][1000 genomes]
rs72861063	1.00[EUR][1000 genomes]
rs72861079	1.00[EUR][1000 genomes]
rs72861081	1.00[EUR][1000 genomes]
rs72861083	1.00[EUR][1000 genomes]
rs72861085	1.00[EUR][1000 genomes]
rs72861095	1.00[EUR][1000 genomes]
rs72861097	1.00[EUR][1000 genomes]
rs72861101	1.00[EUR][1000 genomes]
rs72862310	1.00[EUR][1000 genomes]
rs72862320	1.00[EUR][1000 genomes]
rs72862323	1.00[EUR][1000 genomes]
rs72862324	1.00[EUR][1000 genomes]
rs72862327	1.00[EUR][1000 genomes]
rs72862332	1.00[EUR][1000 genomes]
rs72862333	1.00[EUR][1000 genomes]
rs72862335	1.00[EUR][1000 genomes]
rs72862385	0.90[EUR][1000 genomes]
rs72862390	0.81[EUR][1000 genomes]
rs9292	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10566200-10572800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr11:10570600-10571400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:10570800-10572200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:10570800-10572200	Enhancers	NHDF-Ad	bronchial

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