Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs57314888	1.00[EUR][1000 genomes]
rs57445613	1.00[EUR][1000 genomes]
rs58532638	1.00[EUR][1000 genomes]
rs58743358	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6770159	1.00[EUR][1000 genomes]
rs72873058	1.00[EUR][1000 genomes]
rs72873065	1.00[EUR][1000 genomes]
rs72886241	1.00[EUR][1000 genomes]
rs72886256	1.00[EUR][1000 genomes]
rs72886257	1.00[EUR][1000 genomes]
rs72886265	1.00[EUR][1000 genomes]
rs72889103	1.00[EUR][1000 genomes]
rs72889112	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72889113	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72889137	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72889156	1.00[EUR][1000 genomes]
rs72889167	1.00[EUR][1000 genomes]
rs73836114	1.00[EUR][1000 genomes]
rs741890	1.00[EUR][1000 genomes]
rs9851572	1.00[EUR][1000 genomes]
rs9851737	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534038	chr3:60781917-60993082	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2757872	chr3:60781943-61019003	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv2759152	chr3:60781943-61220809	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60871400-60876000	Weak transcription	Pancreas	Pancrea
2	chr3:60871600-60873800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr3:60872600-60879600	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr3:60872800-60873600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr3:60872800-60876000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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