Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs55982437	1.00[EUR][1000 genomes]
rs56161483	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56294119	1.00[EUR][1000 genomes]
rs56670526	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57014811	1.00[EUR][1000 genomes]
rs57553223	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57836669	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60300179	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6773643	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6779407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6787552	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72914424	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72916530	1.00[EUR][1000 genomes]
rs72916536	1.00[EUR][1000 genomes]
rs72916558	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72916580	1.00[EUR][1000 genomes]
rs72916583	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72918524	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72920614	1.00[AMR][1000 genomes]
rs73845724	1.00[EUR][1000 genomes]
rs73845771	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73845778	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv877113	chr3:86205676-86298087	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv877114	chr3:86257272-86328961	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86256800-86258800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:86257200-86259000	Enhancers	HUES48 Cell Line	embryonic stem cell

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