Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr3:69176298-69176560	K562	blood:	n/a	n/a
2	RCOR1	chr3:69176186-69176477	K562	blood:	n/a	n/a
3	EP300	chr3:69176186-69176526	Hela-S3	cervix:	n/a	n/a
4	CEBPB	chr3:69176205-69176472	K562	blood:	n/a	chr3:69176361-69176372
5	CEBPB	chr3:69176161-69176525	HepG2	liver:	n/a	chr3:69176361-69176372
6	CEBPB	chr3:69176142-69176643	Hela-S3	cervix:	n/a	chr3:69176361-69176372
7	CEBPB	chr3:69176221-69176501	K562	blood:	n/a	chr3:69176361-69176372

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:69170561..69172820-chr3:69174894..69177000,3	MCF-7	breast:

Variant related genes	Relation type
LMOD3	TF binding region
ENSG00000163380	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10865644	0.94[ASN][1000 genomes]
rs10865645	0.94[ASN][1000 genomes]
rs11128114	0.94[ASN][1000 genomes]
rs11719988	0.92[ASN][1000 genomes]
rs17005393	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28591428	0.93[ASN][1000 genomes]
rs34890270	0.93[ASN][1000 genomes]
rs4241384	0.92[ASN][1000 genomes]
rs4241395	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4389485	0.91[ASN][1000 genomes]
rs4407408	0.88[ASN][1000 genomes]
rs4425262	0.94[ASN][1000 genomes]
rs4461426	0.94[ASN][1000 genomes]
rs4504171	0.94[ASN][1000 genomes]
rs4522769	0.94[ASN][1000 genomes]
rs4560302	0.94[ASN][1000 genomes]
rs4563416	0.94[ASN][1000 genomes]
rs4563417	0.91[ASN][1000 genomes]
rs4589943	0.85[ASN][1000 genomes]
rs4621333	0.94[ASN][1000 genomes]
rs6792358	0.94[ASN][1000 genomes]
rs72924889	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9883017	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv521439	chr3:69171803-69185740	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69173000-69177200	Weak transcription	Fetal Muscle Leg	muscle
2	chr3:69175400-69178000	Enhancers	Psoas Muscle	Psoas
3	chr3:69175400-69179200	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr3:69176000-69176600	Enhancers	Hela-S3	cervix
5	chr3:69176000-69179000	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr3:69176400-69177000	Weak transcription	Placenta	Placenta

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