Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10865644	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10865645	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11128114	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs17005393	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs28591428	0.91[ASN][1000 genomes]
rs34890270	0.91[ASN][1000 genomes]
rs4241384	0.97[ASN][1000 genomes]
rs4241395	0.92[ASN][1000 genomes]
rs4389485	0.94[ASN][1000 genomes]
rs4407408	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4425262	0.97[ASN][1000 genomes]
rs4446215	0.80[ASN][1000 genomes]
rs4461426	0.98[ASN][1000 genomes]
rs4504171	0.98[ASN][1000 genomes]
rs4522769	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs4560302	0.98[ASN][1000 genomes]
rs4563416	0.98[ASN][1000 genomes]
rs4563417	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4589943	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4621333	0.98[ASN][1000 genomes]
rs6792358	0.98[ASN][1000 genomes]
rs6797538	0.80[ASN][1000 genomes]
rs72924889	0.90[ASN][1000 genomes]
rs72924892	0.92[ASN][1000 genomes]
rs7635939	0.80[ASN][1000 genomes]
rs7638543	0.80[ASN][1000 genomes]
rs9883017	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11719988	AMPD3	trans	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69194200-69198800	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr3:69194400-69200600	Weak transcription	Psoas Muscle	Psoas
3	chr3:69195200-69197400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr3:69196800-69197000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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