Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:69187723..69190468-chr3:69191360..69194154,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10865644	0.95[ASN][1000 genomes]
rs10865645	0.95[ASN][1000 genomes]
rs11128114	0.95[ASN][1000 genomes]
rs11719988	0.94[ASN][1000 genomes]
rs17005393	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28591428	0.98[ASN][1000 genomes]
rs34890270	0.98[ASN][1000 genomes]
rs4241384	0.81[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs4241395	0.91[ASN][1000 genomes]
rs4407408	0.96[ASN][1000 genomes]
rs4425262	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4461426	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4504171	0.92[ASW][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];0.90[JPT][hapmap];0.97[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4522769	0.95[ASN][1000 genomes]
rs4525874	0.96[GIH][hapmap]
rs4560302	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4563416	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4563417	0.92[ASN][1000 genomes]
rs4589943	0.86[ASN][1000 genomes]
rs4621333	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6792358	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];0.90[JPT][hapmap];0.92[LWK][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs72924888	0.85[EUR][1000 genomes]
rs72924889	0.88[ASN][1000 genomes]
rs72924892	0.91[ASN][1000 genomes]
rs7634162	0.96[EUR][1000 genomes]
rs937863	0.93[GIH][hapmap]
rs9883017	1.00[CHB][hapmap];0.90[JPT][hapmap];0.83[YRI][hapmap];0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69178000-69193600	Weak transcription	Psoas Muscle	Psoas
2	chr3:69180200-69190600	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:69187000-69190400	Weak transcription	Hela-S3	cervix

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