Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:73199395..73201874-chr6:73208797..73210317,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1328854	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16882514	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6453587	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72939331	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72939337	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72939341	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72946163	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72946166	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72946175	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72946180	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72946188	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72946195	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72946200	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72948110	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72948112	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72948119	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72948122	0.92[EUR][1000 genomes]
rs72948128	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72948131	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72948134	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72950036	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72950038	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023809	chr6:73157813-73477997	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv538303	chr6:73157813-73477997	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73208000-73209600	Enhancers	Fetal Brain Male	brain
2	chr6:73209200-73209400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:73209200-73209400	Enhancers	Esophagus	oesophagus

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