The 2.0 version of rSNPBase

Variant report

Variant rs72969443
Chromosome Location chr11:86528671-86528672
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86514000-86530000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr11:86517200-86529800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr11:86520000-86549200 Weak transcription Ovary ovary
4 chr11:86521000-86551400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr11:86522800-86544400 Weak transcription Fetal Kidney kidney
6 chr11:86525200-86528800 Enhancers Placenta Amnion Placenta Amnion
7 chr11:86525200-86529200 Enhancers HSMM muscle
8 chr11:86525200-86530400 Enhancers Muscle Satellite Cultured Cells --
9 chr11:86525200-86531000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr11:86525600-86529400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr11:86525800-86530200 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr11:86525800-86530400 Enhancers Hela-S3 cervix
13 chr11:86525800-86530800 Enhancers Rectal Smooth Muscle rectum
14 chr11:86526000-86529400 Weak transcription Fetal Heart heart
15 chr11:86526000-86529400 Weak transcription Fetal Lung lung
16 chr11:86526400-86529000 Weak transcription Fetal Muscle Leg muscle
17 chr11:86526800-86530200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr11:86526800-86531000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr11:86527200-86528800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr11:86527400-86529800 Weak transcription Aorta Aorta
21 chr11:86527400-86530000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr11:86527400-86530000 Weak transcription Right Atrium heart
23 chr11:86527400-86530200 Enhancers HSMMtube muscle
24 chr11:86527400-86530400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr11:86527400-86531000 Enhancers Colon Smooth Muscle Colon
26 chr11:86527600-86528800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr11:86527600-86528800 Weak transcription NHLF lung
28 chr11:86527600-86529000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr11:86527600-86529000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr11:86527600-86529800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr11:86527800-86528800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr11:86527800-86528800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr11:86527800-86528800 Weak transcription NHDF-Ad bronchial
34 chr11:86527800-86529000 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr11:86527800-86529000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:86527800-86529000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr11:86527800-86529000 Weak transcription NHEK skin
38 chr11:86527800-86529400 Weak transcription Fetal Stomach stomach
39 chr11:86527800-86529800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr11:86527800-86530400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr11:86527800-86534400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:86528000-86529000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:86528000-86529000 Weak transcription Stomach Smooth Muscle stomach
44 chr11:86528000-86529000 Enhancers A549 lung
45 chr11:86528000-86529800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr11:86528000-86530200 Enhancers HUVEC blood vessel
47 chr11:86528000-86530400 Enhancers NH-A brain
48 chr11:86528000-86542600 Weak transcription Adipose Nuclei Adipose
49 chr11:86528400-86529000 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr11:86528400-86529200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015