The 2.0 version of rSNPBase

Variant report

Variant rs73035116
Chromosome Location chr1:173687066-173687067
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173684800-173687600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:173684800-173695000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:173684800-173702800 Weak transcription Spleen Spleen
4 chr1:173685000-173687200 Weak transcription Lung lung
5 chr1:173685000-173695200 Weak transcription Esophagus oesophagus
6 chr1:173685000-173695200 Weak transcription Pancreas Pancrea
7 chr1:173685000-173720800 Weak transcription Small Intestine intestine
8 chr1:173685200-173687400 Enhancers Duodenum Smooth Muscle Duodenum
9 chr1:173685200-173687600 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr1:173685200-173687800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr1:173685200-173687800 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr1:173685200-173689400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:173685200-173690400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:173685200-173692200 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr1:173685200-173692200 Weak transcription Placenta Placenta
16 chr1:173685200-173693400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:173685200-173694000 Weak transcription Left Ventricle heart
18 chr1:173685200-173694200 Weak transcription Brain Hippocampus Middle brain
19 chr1:173685200-173694400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:173685200-173694400 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:173685200-173694400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:173685200-173694400 Weak transcription Brain Cingulate Gyrus brain
23 chr1:173685200-173694400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:173685200-173694600 Weak transcription Colonic Mucosa Colon
25 chr1:173685200-173724600 Weak transcription Placenta Amnion Placenta Amnion
26 chr1:173685400-173687200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:173685400-173687200 Weak transcription Primary T cells fromperipheralblood blood
28 chr1:173685400-173687200 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr1:173685400-173687200 Weak transcription Fetal Stomach stomach
30 chr1:173685400-173687400 Enhancers Primary T helper cells fromperipheralblood blood
31 chr1:173685400-173690000 Weak transcription Fetal Muscle Leg muscle
32 chr1:173685400-173690400 Weak transcription Primary monocytes fromperipheralblood blood
33 chr1:173685400-173690600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:173685400-173690600 Weak transcription Fetal Muscle Trunk muscle
35 chr1:173685400-173691200 Weak transcription Thymus Thymus
36 chr1:173685400-173691400 Weak transcription Aorta Aorta
37 chr1:173685400-173694000 Weak transcription Primary B cells from peripheral blood blood
38 chr1:173685400-173694200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:173685400-173694400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:173685400-173694400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:173685400-173694400 Weak transcription Fetal Brain Male brain
42 chr1:173685400-173702800 Weak transcription Psoas Muscle Psoas
43 chr1:173685400-173725000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:173685600-173687200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:173685600-173691200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:173685600-173692200 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr1:173685600-173693800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr1:173685600-173694200 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr1:173685600-173694600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr1:173685600-173702800 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015