Variant report
| Variant | rs73159103 |
|---|---|
| Chromosome Location | chr3:146349312-146349313 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:89)
| rs_ID | r2[population] |
|---|---|
| rs10222373 | 1.00[ASN][1000 genomes] |
| rs10470459 | 1.00[ASN][1000 genomes] |
| rs10470460 | 1.00[ASN][1000 genomes] |
| rs10513283 | 0.81[AMR][1000 genomes] |
| rs10513298 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10935644 | 1.00[ASN][1000 genomes] |
| rs12330695 | 1.00[ASN][1000 genomes] |
| rs12695830 | 1.00[ASN][1000 genomes] |
| rs1319533 | 1.00[ASN][1000 genomes] |
| rs13324524 | 1.00[ASN][1000 genomes] |
| rs13324873 | 1.00[ASN][1000 genomes] |
| rs13325265 | 1.00[ASN][1000 genomes] |
| rs13353410 | 1.00[ASN][1000 genomes] |
| rs1402737 | 1.00[ASN][1000 genomes] |
| rs1431967 | 1.00[ASN][1000 genomes] |
| rs1431969 | 1.00[ASN][1000 genomes] |
| rs1521579 | 1.00[ASN][1000 genomes] |
| rs17367309 | 0.83[AFR][1000 genomes] |
| rs17367522 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17368735 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17431845 | 1.00[ASN][1000 genomes] |
| rs17431888 | 1.00[ASN][1000 genomes] |
| rs17431978 | 1.00[ASN][1000 genomes] |
| rs17432215 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17433714 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17434511 | 0.81[AMR][1000 genomes] |
| rs17434589 | 0.81[AMR][1000 genomes] |
| rs17434603 | 0.81[AMR][1000 genomes] |
| rs2116430 | 1.00[ASN][1000 genomes] |
| rs28498057 | 1.00[ASN][1000 genomes] |
| rs28539305 | 1.00[ASN][1000 genomes] |
| rs28729741 | 1.00[ASN][1000 genomes] |
| rs55848109 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56046201 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56737593 | 1.00[ASN][1000 genomes] |
| rs58365455 | 1.00[ASN][1000 genomes] |
| rs6771456 | 0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6783801 | 1.00[ASN][1000 genomes] |
| rs6794178 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6808571 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6809355 | 1.00[ASN][1000 genomes] |
| rs73156912 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73156972 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73156981 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73156988 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73156990 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73156995 | 0.81[AMR][1000 genomes] |
| rs73156997 | 0.81[AMR][1000 genomes] |
| rs73159106 | 0.81[AMR][1000 genomes] |
| rs73159112 | 0.81[AMR][1000 genomes] |
| rs73159127 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73159146 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73159151 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73159171 | 1.00[ASN][1000 genomes] |
| rs7610634 | 1.00[ASN][1000 genomes] |
| rs7613246 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7614167 | 1.00[ASN][1000 genomes] |
| rs7625618 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7626080 | 1.00[ASN][1000 genomes] |
| rs7650149 | 1.00[ASN][1000 genomes] |
| rs7651273 | 0.81[AMR][1000 genomes] |
| rs9289733 | 1.00[ASN][1000 genomes] |
| rs9810942 | 1.00[ASN][1000 genomes] |
| rs9818401 | 1.00[ASN][1000 genomes] |
| rs9819872 | 1.00[ASN][1000 genomes] |
| rs9820879 | 1.00[ASN][1000 genomes] |
| rs9826710 | 1.00[ASN][1000 genomes] |
| rs9831349 | 1.00[ASN][1000 genomes] |
| rs9835696 | 1.00[ASN][1000 genomes] |
| rs9836951 | 1.00[ASN][1000 genomes] |
| rs9841310 | 1.00[ASN][1000 genomes] |
| rs9841704 | 1.00[ASN][1000 genomes] |
| rs9847241 | 1.00[ASN][1000 genomes] |
| rs9850124 | 1.00[ASN][1000 genomes] |
| rs9851720 | 1.00[ASN][1000 genomes] |
| rs9852256 | 1.00[ASN][1000 genomes] |
| rs9857093 | 1.00[ASN][1000 genomes] |
| rs9859125 | 1.00[ASN][1000 genomes] |
| rs9860770 | 1.00[ASN][1000 genomes] |
| rs9861056 | 1.00[ASN][1000 genomes] |
| rs9862802 | 1.00[ASN][1000 genomes] |
| rs9863350 | 1.00[ASN][1000 genomes] |
| rs9863944 | 1.00[ASN][1000 genomes] |
| rs9868411 | 1.00[ASN][1000 genomes] |
| rs9868687 | 1.00[ASN][1000 genomes] |
| rs9869328 | 1.00[ASN][1000 genomes] |
| rs9872644 | 1.00[ASN][1000 genomes] |
| rs9874910 | 1.00[ASN][1000 genomes] |
| rs9881534 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:146344600-146351000 | Weak transcription | Colon Smooth Muscle | Colon |
| 2 | chr3:146346000-146350800 | Weak transcription | HepG2 | liver |
| 3 | chr3:146349200-146350200 | Weak transcription | Placenta Amnion | Placenta Amnion |
