The 2.0 version of rSNPBase

Variant report

Variant rs73207542
Chromosome Location chr5:108177382-108177383
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108146800-108183600 Weak transcription Ovary ovary
2 chr5:108147000-108198800 Weak transcription Aorta Aorta
3 chr5:108147000-108208800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr5:108156400-108178200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr5:108164800-108182400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr5:108165800-108181000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr5:108165800-108194200 Weak transcription NHEK skin
8 chr5:108166400-108193600 Weak transcription Primary B cells from cord blood blood
9 chr5:108166400-108203200 Weak transcription HSMM muscle
10 chr5:108166600-108194600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr5:108166600-108217000 Weak transcription Left Ventricle heart
12 chr5:108166800-108178400 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr5:108167200-108178000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr5:108167200-108220400 Weak transcription Fetal Lung lung
15 chr5:108167600-108186400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:108167600-108187000 Weak transcription Fetal Intestine Small intestine
17 chr5:108167800-108186200 Weak transcription Fetal Muscle Leg muscle
18 chr5:108168000-108182200 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr5:108168200-108185200 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr5:108168200-108186800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr5:108168200-108194400 Weak transcription Fetal Heart heart
22 chr5:108168200-108195000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr5:108168200-108203800 Weak transcription Adipose Nuclei Adipose
24 chr5:108168400-108181800 Weak transcription Osteobl bone
25 chr5:108168800-108180200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:108169400-108229200 Weak transcription Fetal Stomach stomach
27 chr5:108169800-108184800 Weak transcription Fetal Brain Male brain
28 chr5:108170200-108181600 Weak transcription HMEC breast
29 chr5:108172000-108194000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:108172400-108179800 Weak transcription Brain Substantia Nigra brain
31 chr5:108173000-108199800 Weak transcription Brain Angular Gyrus brain
32 chr5:108173400-108239800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr5:108174000-108180800 Weak transcription Lung lung
34 chr5:108174600-108178200 Weak transcription Hela-S3 cervix
35 chr5:108174600-108186600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr5:108175200-108185400 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr5:108175400-108179400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr5:108175400-108194200 Weak transcription Muscle Satellite Cultured Cells --
39 chr5:108175600-108178000 Weak transcription Primary T cells from cord blood blood
40 chr5:108176000-108177600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr5:108176200-108179000 Weak transcription Brain Cingulate Gyrus brain
42 chr5:108176600-108179800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr5:108176800-108178400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr5:108177000-108181000 Weak transcription Liver Liver
45 chr5:108177200-108178200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr5:108177200-108184600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015