The 2.0 version of rSNPBase

Variant report

Variant rs73207509
Chromosome Location chr5:108114165-108114166
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108085600-108119800 Weak transcription Left Ventricle heart
2 chr5:108086200-108119200 Weak transcription Fetal Kidney kidney
3 chr5:108086200-108120600 Weak transcription Brain Hippocampus Middle brain
4 chr5:108089800-108119400 Weak transcription Hela-S3 cervix
5 chr5:108089800-108119800 Weak transcription HSMM muscle
6 chr5:108090200-108127600 Weak transcription NH-A brain
7 chr5:108095000-108122600 Weak transcription Right Ventricle heart
8 chr5:108095600-108119400 Weak transcription Aorta Aorta
9 chr5:108096000-108119600 Weak transcription Primary B cells from cord blood blood
10 chr5:108096200-108119800 Weak transcription HSMMtube muscle
11 chr5:108096400-108134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:108096600-108119400 Weak transcription Primary T cells from cord blood blood
13 chr5:108098400-108128000 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr5:108099200-108114600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr5:108099200-108119400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr5:108099200-108119400 Weak transcription H9 Cell Line embryonic stem cell
17 chr5:108099200-108119800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr5:108099400-108119200 Weak transcription A549 lung
19 chr5:108099400-108122400 Weak transcription Brain Cingulate Gyrus brain
20 chr5:108099600-108117200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr5:108099600-108119400 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr5:108100800-108119400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:108101600-108117600 Weak transcription Muscle Satellite Cultured Cells --
24 chr5:108101600-108119600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:108101600-108127600 Weak transcription Osteobl bone
26 chr5:108101800-108117200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:108102600-108119800 Weak transcription Pancreas Pancrea
28 chr5:108102800-108119400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr5:108103000-108119400 Weak transcription Lung lung
30 chr5:108103400-108119600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr5:108104600-108119200 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr5:108105200-108119600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr5:108105400-108117200 Weak transcription Psoas Muscle Psoas
34 chr5:108105400-108123400 Weak transcription Brain Anterior Caudate brain
35 chr5:108105400-108130600 Weak transcription Rectal Smooth Muscle rectum
36 chr5:108105400-108133200 Weak transcription NHDF-Ad bronchial
37 chr5:108105600-108117600 Weak transcription Colon Smooth Muscle Colon
38 chr5:108107000-108119400 Weak transcription Fetal Stomach stomach
39 chr5:108108000-108119800 Weak transcription Stomach Smooth Muscle stomach
40 chr5:108108600-108114600 Weak transcription Fetal Lung lung
41 chr5:108109400-108119400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr5:108110000-108116800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr5:108110000-108117400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr5:108110000-108119400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr5:108110000-108119400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:108110000-108119600 Weak transcription Ovary ovary
47 chr5:108110000-108119800 Weak transcription Adipose Nuclei Adipose
48 chr5:108110200-108117200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr5:108111600-108119400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015