The 2.0 version of rSNPBase

Variant report

Variant rs73207512
Chromosome Location chr5:108121829-108121830
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108090200-108127600 Weak transcription NH-A brain
2 chr5:108095000-108122600 Weak transcription Right Ventricle heart
3 chr5:108096400-108134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:108098400-108128000 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr5:108099400-108122400 Weak transcription Brain Cingulate Gyrus brain
6 chr5:108101600-108127600 Weak transcription Osteobl bone
7 chr5:108105400-108123400 Weak transcription Brain Anterior Caudate brain
8 chr5:108105400-108130600 Weak transcription Rectal Smooth Muscle rectum
9 chr5:108105400-108133200 Weak transcription NHDF-Ad bronchial
10 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion
11 chr5:108117600-108123600 Weak transcription Brain Angular Gyrus brain
12 chr5:108117800-108122800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr5:108117800-108138200 Weak transcription Liver Liver
14 chr5:108118000-108122200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:108118000-108122800 Weak transcription Brain Substantia Nigra brain
16 chr5:108118000-108132800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr5:108118200-108126600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr5:108118200-108136800 Weak transcription NHLF lung
19 chr5:108119200-108123800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
20 chr5:108119400-108123200 ZNF genes & repeats Fetal Intestine Small intestine
21 chr5:108119400-108124000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:108119600-108123400 Weak transcription Colon Smooth Muscle Colon
23 chr5:108120000-108124000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr5:108120000-108136800 Weak transcription A549 lung
25 chr5:108120200-108122800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr5:108120200-108123000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr5:108120200-108123600 Weak transcription Muscle Satellite Cultured Cells --
28 chr5:108120200-108123600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr5:108120200-108123600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr5:108120200-108123600 Weak transcription Fetal Brain Male brain
31 chr5:108120200-108123800 Weak transcription HMEC breast
32 chr5:108120200-108124000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr5:108120200-108125600 Weak transcription Duodenum Mucosa Duodenum
34 chr5:108120200-108137600 Weak transcription Spleen Spleen
35 chr5:108120200-108142200 Weak transcription Aorta Aorta
36 chr5:108120400-108123400 Weak transcription Left Ventricle heart
37 chr5:108120600-108146400 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr5:108120800-108122600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr5:108120800-108146400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr5:108121000-108122000 Enhancers NHEK skin
41 chr5:108121000-108122200 Weak transcription Fetal Muscle Trunk muscle
42 chr5:108121000-108122800 Weak transcription Stomach Smooth Muscle stomach
43 chr5:108121000-108122800 Weak transcription HSMM muscle
44 chr5:108121000-108123600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:108121000-108123800 Weak transcription Pancreas Pancrea
46 chr5:108121000-108138600 Weak transcription Fetal Kidney kidney
47 chr5:108121000-108139000 Weak transcription Primary T cells from cord blood blood
48 chr5:108121000-108139200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr5:108121200-108122600 Weak transcription Fetal Brain Female brain
50 chr5:108121200-108122600 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015