Variant report

Variant	rs73236728
Chromosome Location	chr8:67097878-67097879
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10096789	0.95[EUR][1000 genomes]
rs13439818	0.90[EUR][1000 genomes]
rs34083382	0.92[EUR][1000 genomes]
rs55640054	0.90[EUR][1000 genomes]
rs55691225	0.95[EUR][1000 genomes]
rs55745275	0.95[EUR][1000 genomes]
rs56163324	0.90[EUR][1000 genomes]
rs56176008	0.87[EUR][1000 genomes]
rs57390453	0.90[EUR][1000 genomes]
rs61738600	0.90[EUR][1000 genomes]
rs6472244	0.90[EUR][1000 genomes]
rs6982394	0.90[EUR][1000 genomes]
rs6983227	0.90[EUR][1000 genomes]
rs6986947	0.90[EUR][1000 genomes]
rs6990486	0.90[EUR][1000 genomes]
rs6992031	0.90[EUR][1000 genomes]
rs6992434	0.90[EUR][1000 genomes]
rs6998258	0.82[EUR][1000 genomes]
rs7005882	0.90[EUR][1000 genomes]
rs7006209	0.90[EUR][1000 genomes]
rs7010547	0.90[EUR][1000 genomes]
rs749328	0.95[EUR][1000 genomes]
rs7813194	0.95[EUR][1000 genomes]
rs7813201	0.95[EUR][1000 genomes]
rs7838582	0.90[EUR][1000 genomes]
rs7839635	0.82[EUR][1000 genomes]
rs7843436	0.90[EUR][1000 genomes]
rs7845017	0.90[EUR][1000 genomes]
rs884325	0.90[EUR][1000 genomes]
rs959302	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67097600-67098600	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr8:67097800-67100000	Enhancers	iPS-18 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links