Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66991083..66994704-chr8:67025048..67026933,3	MCF-7	breast:
2	chr8:66990892..66992963-chr8:66994484..66996081,2	K562	blood:

Variant related genes	Relation type
ENSG00000253190	Chromatin interaction

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10096789	0.95[EUR][1000 genomes]
rs10098823	1.00[CEU][hapmap]
rs11779150	1.00[CEU][hapmap]
rs12156080	1.00[CEU][hapmap]
rs13439818	0.90[EUR][1000 genomes]
rs34083382	0.92[EUR][1000 genomes]
rs55640054	1.00[EUR][1000 genomes]
rs55691225	0.95[EUR][1000 genomes]
rs55745275	0.95[EUR][1000 genomes]
rs56163324	1.00[EUR][1000 genomes]
rs56176008	0.97[EUR][1000 genomes]
rs57390453	1.00[EUR][1000 genomes]
rs61738600	1.00[EUR][1000 genomes]
rs6472244	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6982394	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6983227	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6986947	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6990486	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6992031	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6992434	1.00[EUR][1000 genomes]
rs6998258	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs7006209	1.00[CEU][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7010547	1.00[EUR][1000 genomes]
rs73236728	0.90[EUR][1000 genomes]
rs749328	0.95[EUR][1000 genomes]
rs7813194	0.95[EUR][1000 genomes]
rs7813201	0.95[EUR][1000 genomes]
rs7838582	1.00[EUR][1000 genomes]
rs7839635	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs7843436	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7845017	1.00[EUR][1000 genomes]
rs884325	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs959302	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66989200-66993800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:66991600-66993000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr8:66991600-66993000	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr8:66991800-66992600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:66991800-66992800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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