Variant report

Variant	rs73270208
Chromosome Location	chr10:44409488-44409489
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs55792208	1.00[AMR][1000 genomes]
rs56333140	1.00[AMR][1000 genomes]
rs56832227	1.00[AMR][1000 genomes]
rs57792249	1.00[AMR][1000 genomes]
rs59695605	1.00[AMR][1000 genomes]
rs60146158	1.00[AMR][1000 genomes]
rs61141534	1.00[AMR][1000 genomes]
rs73270215	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73285682	0.80[AFR][1000 genomes]
rs74138076	1.00[AMR][1000 genomes]
rs74138078	1.00[AMR][1000 genomes]
rs74138081	1.00[AMR][1000 genomes]
rs74138085	1.00[AMR][1000 genomes]
rs74138088	1.00[AMR][1000 genomes]
rs74138090	1.00[AMR][1000 genomes]
rs74138904	1.00[AMR][1000 genomes]
rs74138908	1.00[AMR][1000 genomes]
rs74138909	1.00[AMR][1000 genomes]
rs74138917	1.00[AMR][1000 genomes]
rs74138926	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74138932	1.00[AMR][1000 genomes]
rs74138933	1.00[AMR][1000 genomes]
rs74138934	1.00[AMR][1000 genomes]
rs74138936	1.00[AMR][1000 genomes]
rs74138940	1.00[AMR][1000 genomes]
rs74138951	1.00[AMR][1000 genomes]
rs74138952	1.00[AMR][1000 genomes]
rs74138953	1.00[AMR][1000 genomes]
rs74138957	1.00[AMR][1000 genomes]
rs74138965	1.00[AMR][1000 genomes]
rs74138983	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44406400-44417800	Weak transcription	Right Atrium	heart
2	chr10:44406800-44421800	Weak transcription	Fetal Heart	heart
3	chr10:44407600-44409800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr10:44408000-44409600	Enhancers	HMEC	breast
5	chr10:44408000-44409800	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr10:44408200-44409800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr10:44408200-44409800	Enhancers	GM12878-XiMat	blood
8	chr10:44408200-44424000	Weak transcription	Right Ventricle	heart
9	chr10:44408400-44409600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr10:44408400-44409600	Enhancers	Primary T cells fromperipheralblood	blood
11	chr10:44408400-44409800	Enhancers	NHEK	skin
12	chr10:44408800-44409800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr10:44409200-44409600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr10:44409200-44409600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr10:44409200-44409800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr10:44409400-44409600	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr10:44409400-44409600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr10:44409400-44409600	Enhancers	Spleen	Spleen
19	chr10:44409400-44409800	Enhancers	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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