Variant report

Variant	rs74138940
Chromosome Location	chr10:44423905-44423906
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs55792208	1.00[AMR][1000 genomes]
rs56333140	1.00[AMR][1000 genomes]
rs56832227	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57792249	1.00[AMR][1000 genomes]
rs59695605	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60146158	1.00[AMR][1000 genomes]
rs61141534	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73270208	1.00[AMR][1000 genomes]
rs73270215	1.00[AMR][1000 genomes]
rs74138076	1.00[AMR][1000 genomes]
rs74138078	1.00[AMR][1000 genomes]
rs74138081	1.00[AMR][1000 genomes]
rs74138085	1.00[AMR][1000 genomes]
rs74138088	1.00[AMR][1000 genomes]
rs74138090	1.00[AMR][1000 genomes]
rs74138904	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138908	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138909	1.00[AMR][1000 genomes]
rs74138917	1.00[AMR][1000 genomes]
rs74138926	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138932	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138933	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138934	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138936	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74138951	1.00[AMR][1000 genomes]
rs74138952	1.00[AMR][1000 genomes]
rs74138953	1.00[AMR][1000 genomes]
rs74138957	1.00[AMR][1000 genomes]
rs74138965	1.00[AMR][1000 genomes]
rs74138983	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44408200-44424000	Weak transcription	Right Ventricle	heart
2	chr10:44418200-44424000	Weak transcription	Left Ventricle	heart
3	chr10:44421800-44426000	Enhancers	Fetal Heart	heart
4	chr10:44422800-44437600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:44423400-44424800	Weak transcription	Osteobl	bone
6	chr10:44423800-44424400	Enhancers	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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