Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10112168	1.00[EUR][1000 genomes]
rs1119015	1.00[EUR][1000 genomes]
rs13439088	1.00[EUR][1000 genomes]
rs16874050	1.00[EUR][1000 genomes]
rs16874113	1.00[EUR][1000 genomes]
rs28472579	1.00[EUR][1000 genomes]
rs4588821	1.00[EUR][1000 genomes]
rs57722865	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57753827	1.00[EUR][1000 genomes]
rs57832263	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58431748	1.00[EUR][1000 genomes]
rs60129439	1.00[EUR][1000 genomes]
rs61088261	1.00[EUR][1000 genomes]
rs6988642	1.00[EUR][1000 genomes]
rs73299507	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73299558	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73299567	1.00[EUR][1000 genomes]
rs73299601	1.00[AMR][1000 genomes]
rs73698605	1.00[EUR][1000 genomes]
rs73698620	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73700539	1.00[EUR][1000 genomes]
rs73700540	1.00[EUR][1000 genomes]
rs73700541	1.00[EUR][1000 genomes]
rs73700543	1.00[EUR][1000 genomes]
rs73700544	1.00[EUR][1000 genomes]
rs73700549	1.00[EUR][1000 genomes]
rs73700552	1.00[EUR][1000 genomes]
rs9283943	1.00[EUR][1000 genomes]
rs9297376	1.00[EUR][1000 genomes]
rs9297377	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv891262	chr8:107076421-107209378	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107180400-107180800	Enhancers	Aorta	Aorta
2	chr8:107180600-107181000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search: