Variant report

Variant	rs73336597
Chromosome Location	chr14:81183548-81183549
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81163145..81165806-chr14:81181268..81184097,2	MCF-7	breast:

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10133617	1.00[EUR][1000 genomes]
rs10136245	1.00[EUR][1000 genomes]
rs10137925	1.00[EUR][1000 genomes]
rs10140445	1.00[EUR][1000 genomes]
rs10144134	1.00[EUR][1000 genomes]
rs10150034	1.00[EUR][1000 genomes]
rs10151027	1.00[EUR][1000 genomes]
rs10151108	1.00[EUR][1000 genomes]
rs10220319	1.00[EUR][1000 genomes]
rs1375628	1.00[EUR][1000 genomes]
rs17110847	1.00[EUR][1000 genomes]
rs17111025	1.00[EUR][1000 genomes]
rs2197983	1.00[EUR][1000 genomes]
rs28529404	1.00[EUR][1000 genomes]
rs28650423	1.00[EUR][1000 genomes]
rs327432	1.00[EUR][1000 genomes]
rs327437	1.00[EUR][1000 genomes]
rs56933416	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57834417	1.00[EUR][1000 genomes]
rs58040173	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58133007	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58268321	1.00[EUR][1000 genomes]
rs58594627	1.00[EUR][1000 genomes]
rs58679489	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60977678	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61435414	1.00[EUR][1000 genomes]
rs73326644	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326672	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73328649	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73328655	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73328682	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73330508	1.00[EUR][1000 genomes]
rs73330519	1.00[AMR][1000 genomes]
rs73330520	1.00[AMR][1000 genomes]
rs73330543	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73332696	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73334792	1.00[EUR][1000 genomes]
rs73336577	1.00[EUR][1000 genomes]
rs73336590	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73336591	1.00[EUR][1000 genomes]
rs73338156	1.00[EUR][1000 genomes]
rs73338189	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73338199	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73340105	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73340107	1.00[EUR][1000 genomes]
rs73340171	1.00[EUR][1000 genomes]
rs73340175	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73340517	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73340530	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73342195	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73342506	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73342522	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73342549	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73342552	1.00[EUR][1000 genomes]
rs73342554	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73344006	1.00[EUR][1000 genomes]
rs73344023	1.00[EUR][1000 genomes]
rs73344031	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73344062	1.00[AMR][1000 genomes]
rs74064297	1.00[EUR][1000 genomes]
rs8020092	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv565290	chr14:81085129-81230117	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1035295	chr14:81180999-81236636	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81168400-81184200	Weak transcription	Thymus	Thymus
2	chr14:81172400-81185200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:81172600-81185200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr14:81179200-81186200	Enhancers	Dnd41	blood
5	chr14:81182000-81206400	Weak transcription	Fetal Thymus	thymus
6	chr14:81182800-81224600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood

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