Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16500793..16502464-chr21:16513166..16515545,2	MCF-7	breast:
2	chr21:16435087..16439226-chr21:16501116..16506169,12	MCF-7	breast:

Variant related genes	Relation type
ENSG00000180530	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10482865	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1107603	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17241137	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2403879	0.86[EUR][1000 genomes]
rs2823072	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2823073	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2823078	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2823090	0.86[EUR][1000 genomes]
rs41417546	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56774948	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57145147	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58600183	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59067564	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59121161	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59808093	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60733877	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60840750	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61195764	0.86[EUR][1000 genomes]
rs61284713	0.86[EUR][1000 genomes]
rs7275982	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7276254	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7276414	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7283880	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73891984	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9789844	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16494200-16502600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr21:16494400-16502800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr21:16499800-16502600	Weak transcription	Fetal Muscle Leg	muscle
4	chr21:16499800-16506400	Weak transcription	Left Ventricle	heart
5	chr21:16500400-16505800	Weak transcription	Small Intestine	intestine
6	chr21:16500600-16510800	Weak transcription	Psoas Muscle	Psoas
7	chr21:16500800-16505800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr21:16501200-16506000	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr21:16501400-16505600	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr21:16501800-16506600	Weak transcription	Primary B cells from peripheral blood	blood
11	chr21:16502000-16503800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr21:16502000-16506200	Enhancers	Primary hematopoietic stem cells	blood
13	chr21:16502200-16503000	Enhancers	NHEK	skin
14	chr21:16502200-16506600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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