Variant report
| Variant | rs73366628 |
|---|---|
| Chromosome Location | chr6:15838807-15838808 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr6:15825494..15828253-chr6:15836112..15838842,2 | K562 | blood: | |
| 2 | chr6:15823438..15825544-chr6:15836442..15838890,2 | K562 | blood: | |
| 3 | chr6:15838342..15841785-chr6:16134633..16137410,3 | K562 | blood: | |
| 4 | chr6:15838685..15840880-chr6:15842392..15845284,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:32)
| rs_ID | r2[population] |
|---|---|
| rs10484351 | 0.96[EUR][1000 genomes] |
| rs10484352 | 0.99[EUR][1000 genomes] |
| rs13190874 | 0.95[EUR][1000 genomes] |
| rs13211010 | 0.96[EUR][1000 genomes] |
| rs13218971 | 0.93[EUR][1000 genomes] |
| rs16877105 | 0.95[EUR][1000 genomes] |
| rs16877108 | 0.96[EUR][1000 genomes] |
| rs16877113 | 0.96[EUR][1000 genomes] |
| rs17418707 | 0.97[EUR][1000 genomes] |
| rs17419263 | 0.84[EUR][1000 genomes] |
| rs1927587 | 0.96[EUR][1000 genomes] |
| rs34459959 | 0.88[EUR][1000 genomes] |
| rs35387263 | 0.87[EUR][1000 genomes] |
| rs35511116 | 0.96[EUR][1000 genomes] |
| rs41465249 | 0.82[EUR][1000 genomes] |
| rs41499644 | 0.99[EUR][1000 genomes] |
| rs4712259 | 0.96[EUR][1000 genomes] |
| rs4712260 | 0.93[EUR][1000 genomes] |
| rs4712261 | 0.96[EUR][1000 genomes] |
| rs4716000 | 0.97[EUR][1000 genomes] |
| rs4716002 | 0.95[EUR][1000 genomes] |
| rs4716003 | 0.93[EUR][1000 genomes] |
| rs4716005 | 0.83[EUR][1000 genomes] |
| rs4989041 | 0.97[EUR][1000 genomes] |
| rs55715119 | 0.99[EUR][1000 genomes] |
| rs55756972 | 0.99[EUR][1000 genomes] |
| rs56207716 | 0.99[EUR][1000 genomes] |
| rs56314144 | 0.97[EUR][1000 genomes] |
| rs67428710 | 0.93[EUR][1000 genomes] |
| rs7745776 | 0.97[EUR][1000 genomes] |
| rs7749868 | 0.97[EUR][1000 genomes] |
| rs7750026 | 0.97[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:15825800-15842800 | Weak transcription | Right Atrium | heart |
| 2 | chr6:15837600-15843800 | Weak transcription | K562 | blood |
