Variant report

Variant	rs73399102
Chromosome Location	chr6:28380488-28380489
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1024629	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1159276	1.00[AMR][1000 genomes]
rs28382583	1.00[AMR][1000 genomes]
rs28382610	1.00[AMR][1000 genomes]
rs35951965	1.00[AMR][1000 genomes]
rs36055795	1.00[AMR][1000 genomes]
rs56932220	1.00[AMR][1000 genomes]
rs57062347	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57154605	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57229798	1.00[AMR][1000 genomes]
rs58417073	1.00[AMR][1000 genomes]
rs58863222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58928655	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59126940	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59842349	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62638674	1.00[AMR][1000 genomes]
rs6903306	1.00[AMR][1000 genomes]
rs73385893	1.00[AMR][1000 genomes]
rs73396315	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73396317	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73396335	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73399652	1.00[AMR][1000 genomes]
rs73399679	1.00[AMR][1000 genomes]
rs73399695	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73399697	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73400304	1.00[AMR][1000 genomes]
rs73400305	1.00[AMR][1000 genomes]
rs73402963	1.00[AMR][1000 genomes]
rs73402965	1.00[AMR][1000 genomes]
rs73407107	1.00[AMR][1000 genomes]
rs73407110	1.00[AMR][1000 genomes]
rs73407140	1.00[AMR][1000 genomes]
rs7453044	1.00[AMR][1000 genomes]
rs7766194	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1836974	chr6:28376981-28398748	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28371200-28410400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:28377000-28386600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:28377600-28390200	Weak transcription	Fetal Lung	lung
4	chr6:28379400-28389200	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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