The 2.0 version of rSNPBase

Variant report

Variant rs73425577
Chromosome Location chr6:1938344-1938345
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1905000-1970600 Weak transcription Spleen Spleen
2 chr6:1905400-1962000 Weak transcription Pancreas Pancrea
3 chr6:1910200-1965800 Weak transcription Small Intestine intestine
4 chr6:1915800-1972800 Weak transcription Colonic Mucosa Colon
5 chr6:1916000-1960800 Weak transcription Gastric stomach
6 chr6:1918600-1946400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:1918600-1957800 Weak transcription Dnd41 blood
8 chr6:1919600-1962400 Weak transcription Rectal Smooth Muscle rectum
9 chr6:1924000-1952800 Weak transcription Fetal Stomach stomach
10 chr6:1924400-1941800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr6:1928200-1940800 Weak transcription Hela-S3 cervix
12 chr6:1928800-1938800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr6:1930400-1943400 Weak transcription Duodenum Mucosa Duodenum
14 chr6:1930600-1952600 Weak transcription Fetal Intestine Large intestine
15 chr6:1932400-1940600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr6:1932400-1946800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:1934800-1943800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:1935200-1952200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr6:1935200-1953800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr6:1935400-1946800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:1935400-1953000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr6:1935600-1945200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:1935600-1949000 Weak transcription Primary T cells from cord blood blood
24 chr6:1935800-1964200 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr6:1936400-1960000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr6:1936800-1940400 Weak transcription GM12878-XiMat blood
27 chr6:1936800-1941600 Weak transcription Aorta Aorta
28 chr6:1936800-1958400 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr6:1937000-1942000 Weak transcription Fetal Intestine Small intestine
30 chr6:1937000-1949000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr6:1937400-1961400 Weak transcription Stomach Mucosa stomach
32 chr6:1938000-1941400 Weak transcription HepG2 liver
33 chr6:1938200-1940600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:1938200-1958400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015