The 2.0 version of rSNPBase

Variant report

Variant rs73427404
Chromosome Location chr6:1957105-1957106
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1905000-1970600 Weak transcription Spleen Spleen
2 chr6:1905400-1962000 Weak transcription Pancreas Pancrea
3 chr6:1910200-1965800 Weak transcription Small Intestine intestine
4 chr6:1915800-1972800 Weak transcription Colonic Mucosa Colon
5 chr6:1916000-1960800 Weak transcription Gastric stomach
6 chr6:1918600-1957800 Weak transcription Dnd41 blood
7 chr6:1919600-1962400 Weak transcription Rectal Smooth Muscle rectum
8 chr6:1935800-1964200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr6:1936400-1960000 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr6:1936800-1958400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr6:1937400-1961400 Weak transcription Stomach Mucosa stomach
12 chr6:1938200-1958400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr6:1940800-1967200 Weak transcription Primary B cells from cord blood blood
14 chr6:1940800-1969800 Weak transcription Lung lung
15 chr6:1941400-1958400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:1942400-1960800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr6:1943600-1966000 Weak transcription GM12878-XiMat blood
18 chr6:1944400-1964000 Weak transcription Primary hematopoietic stem cells blood
19 chr6:1945600-1961600 Strong transcription HepG2 liver
20 chr6:1946000-1961000 Weak transcription Left Ventricle heart
21 chr6:1946000-1964000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr6:1947400-1980000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr6:1949000-1958600 Weak transcription Esophagus oesophagus
24 chr6:1949800-1960600 Weak transcription Primary T cells from cord blood blood
25 chr6:1950200-1964200 Weak transcription Primary monocytes fromperipheralblood blood
26 chr6:1950200-1966400 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr6:1951400-1972000 Weak transcription Liver Liver
28 chr6:1953000-1962400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr6:1953200-1960000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr6:1953400-1959600 Weak transcription Duodenum Mucosa Duodenum
31 chr6:1953400-1960600 Weak transcription Fetal Intestine Large intestine
32 chr6:1953400-1977800 Weak transcription Fetal Intestine Small intestine
33 chr6:1953600-1958200 Weak transcription NHEK skin
34 chr6:1953600-1958600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:1953600-1958600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:1953600-1962000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr6:1953600-1963000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr6:1953600-1967200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr6:1953800-1958200 Weak transcription HMEC breast
40 chr6:1953800-1962400 Weak transcription Osteobl bone
41 chr6:1954800-1964200 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015