The 2.0 version of rSNPBase

Variant report

Variant rs73427805
Chromosome Location chr7:120483721-120483722
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:120443000-120488000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr7:120445200-120494400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr7:120468600-120487600 Weak transcription Lung lung
4 chr7:120470600-120484600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr7:120474000-120492400 Weak transcription Fetal Lung lung
6 chr7:120474000-120496400 Weak transcription Stomach Smooth Muscle stomach
7 chr7:120474600-120496600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr7:120476400-120484200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr7:120476600-120492400 Weak transcription Gastric stomach
10 chr7:120477000-120489800 Weak transcription Fetal Muscle Trunk muscle
11 chr7:120477000-120492400 Weak transcription H9 Cell Line embryonic stem cell
12 chr7:120477200-120496200 Weak transcription Aorta Aorta
13 chr7:120478400-120487400 Weak transcription Colonic Mucosa Colon
14 chr7:120479400-120484000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr7:120479400-120488000 Weak transcription Right Atrium heart
16 chr7:120479600-120494000 Weak transcription HUVEC blood vessel
17 chr7:120480000-120488000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr7:120480200-120485000 Weak transcription Fetal Heart heart
19 chr7:120482000-120484200 Genic enhancers Fetal Kidney kidney
20 chr7:120482200-120483800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr7:120482200-120483800 Enhancers Pancreas Pancrea
22 chr7:120482400-120484600 Strong transcription Fetal Intestine Large intestine
23 chr7:120482400-120484600 Strong transcription Fetal Muscle Leg muscle
24 chr7:120482600-120495200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr7:120482600-120496200 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr7:120482800-120484000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr7:120482800-120484600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr7:120482800-120484800 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr7:120482800-120485000 Weak transcription Small Intestine intestine
30 chr7:120482800-120487400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr7:120482800-120492200 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr7:120482800-120496400 Weak transcription Liver Liver
33 chr7:120482800-120496400 Weak transcription Rectal Smooth Muscle rectum
34 chr7:120482800-120496600 Weak transcription Stomach Mucosa stomach
35 chr7:120483200-120483800 Enhancers Right Ventricle heart
36 chr7:120483200-120485400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr7:120483400-120484600 Strong transcription Fetal Intestine Small intestine
38 chr7:120483400-120485200 Weak transcription Duodenum Mucosa Duodenum
39 chr7:120483400-120485200 Strong transcription Fetal Stomach stomach
40 chr7:120483400-120485200 Genic enhancers Left Ventricle heart
41 chr7:120483400-120485800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr7:120483400-120496200 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr7:120483400-120496400 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr7:120483600-120484600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr7:120483600-120484600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr7:120483600-120484800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr7:120483600-120487600 Weak transcription Colon Smooth Muscle Colon
48 chr7:120483600-120496600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015