Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:16402440..16404530-chr11:16626484..16629109,2	K562	blood:
2	chr11:16402440..16405189-chr11:16626177..16627984,2	K562	blood:
3	chr11:16402054..16403718-chr11:16411141..16413467,2	K562	blood:

Variant related genes	Relation type
ENSG00000110693	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1503442	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs16933090	1.00[ASN][1000 genomes]
rs58769283	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61404451	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61469208	0.81[ASN][1000 genomes]
rs73429701	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73431671	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73431677	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73431679	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73431686	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73431697	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433503	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433517	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433521	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433526	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433528	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433538	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433558	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73433560	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7925853	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7938702	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529731	chr11:16122782-16468170	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv553566	chr11:16329009-16799044	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
3	nsv832075	chr11:16391700-16490934	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16388200-16414200	Weak transcription	Fetal Intestine Small	intestine
2	chr11:16398200-16403000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr11:16399400-16404000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:16401800-16403600	Active TSS	K562	blood
5	chr11:16402000-16403000	Enhancers	Pancreatic Islets	Pancreatic Islet
6	chr11:16402200-16403000	Enhancers	NHDF-Ad	bronchial
7	chr11:16402400-16403200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr11:16402400-16405600	Enhancers	NHLF	lung

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