The 2.0 version of rSNPBase

Variant report

Variant rs73471113
Chromosome Location chr7:116394193-116394194
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:116351800-116407000 Weak transcription Duodenum Mucosa Duodenum
2 chr7:116357400-116409800 Weak transcription Placenta Amnion Placenta Amnion
3 chr7:116375000-116418400 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr7:116375800-116411200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr7:116377800-116395600 Weak transcription NH-A brain
6 chr7:116378800-116422200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr7:116381400-116413400 Weak transcription NHLF lung
8 chr7:116381600-116398600 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr7:116381600-116418600 Weak transcription Aorta Aorta
10 chr7:116381800-116407000 Weak transcription Pancreas Pancrea
11 chr7:116382000-116398000 Weak transcription Hela-S3 cervix
12 chr7:116382000-116413400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr7:116382200-116409800 Weak transcription Placenta Placenta
14 chr7:116382400-116396400 Weak transcription HMEC breast
15 chr7:116383000-116396800 Weak transcription Psoas Muscle Psoas
16 chr7:116383600-116397400 Weak transcription HSMM muscle
17 chr7:116383800-116399400 Weak transcription Fetal Muscle Trunk muscle
18 chr7:116383800-116409400 Weak transcription Fetal Kidney kidney
19 chr7:116384000-116397400 Weak transcription NHEK skin
20 chr7:116384000-116405400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr7:116384000-116406200 Weak transcription HepG2 liver
22 chr7:116384200-116395400 Weak transcription Osteobl bone
23 chr7:116384200-116395800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr7:116384200-116411200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr7:116385000-116394200 Weak transcription Muscle Satellite Cultured Cells --
26 chr7:116388400-116416200 Weak transcription Fetal Stomach stomach
27 chr7:116391600-116405400 Strong transcription A549 lung
28 chr7:116391600-116410600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:116392000-116394800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr7:116392200-116396600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr7:116392600-116405400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr7:116392800-116395400 Weak transcription Liver Liver
33 chr7:116392800-116398600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr7:116392800-116411600 Weak transcription NHDF-Ad bronchial
35 chr7:116393000-116403600 Weak transcription Brain Inferior Temporal Lobe brain
36 chr7:116393000-116405400 Weak transcription Fetal Muscle Leg muscle
37 chr7:116393000-116419000 Weak transcription Left Ventricle heart
38 chr7:116393200-116410600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr7:116393400-116409600 Weak transcription HSMMtube muscle
40 chr7:116393600-116396800 Weak transcription Stomach Mucosa stomach
41 chr7:116393800-116397400 Weak transcription HUVEC blood vessel
42 chr7:116394000-116394800 Enhancers Fetal Intestine Small intestine
43 chr7:116394000-116411000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr7:116394000-116415600 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015