Variant report

Variant	rs73487176
Chromosome Location	chr7:119417748-119417749
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:119413236..119417031-chr7:119417738..119421768,6	K562	blood:
2	chr7:119410172..119412912-chr7:119413971..119417842,3	K562	blood:

Extended variants
information (count: 229 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:212)

rs_ID	r²[population]
rs10081200	1.00[ASN][1000 genomes]
rs10233221	1.00[ASN][1000 genomes]
rs10236586	0.92[ASN][1000 genomes]
rs10245797	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10251920	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10258725	1.00[ASN][1000 genomes]
rs10267600	0.85[ASN][1000 genomes]
rs10273802	0.96[ASN][1000 genomes]
rs10274141	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10279052	1.00[ASN][1000 genomes]
rs10279203	0.96[ASN][1000 genomes]
rs10500075	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10500077	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1099820	1.00[ASN][1000 genomes]
rs1099821	0.84[ASN][1000 genomes]
rs11487119	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11761345	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11763158	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11764046	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11764108	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11764197	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11766052	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11767175	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11767335	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11770085	0.85[ASN][1000 genomes]
rs11770087	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11770943	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11771353	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11771830	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11772195	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11973192	0.96[ASN][1000 genomes]
rs11978043	1.00[ASN][1000 genomes]
rs12536246	1.00[ASN][1000 genomes]
rs12537312	0.85[ASN][1000 genomes]
rs12540739	0.85[ASN][1000 genomes]
rs12671360	1.00[ASN][1000 genomes]
rs12706258	0.89[ASN][1000 genomes]
rs12706259	1.00[ASN][1000 genomes]
rs12706263	1.00[ASN][1000 genomes]
rs12706264	1.00[ASN][1000 genomes]
rs12706265	1.00[ASN][1000 genomes]
rs13239182	1.00[ASN][1000 genomes]
rs1357670	1.00[ASN][1000 genomes]
rs1357672	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1357674	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1404078	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1404080	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1404083	0.93[ASN][1000 genomes]
rs1524197	1.00[ASN][1000 genomes]
rs1524199	1.00[ASN][1000 genomes]
rs1524203	1.00[ASN][1000 genomes]
rs1524205	1.00[ASN][1000 genomes]
rs1581504	1.00[ASN][1000 genomes]
rs1589754	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1608585	1.00[ASN][1000 genomes]
rs17142284	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17142302	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17142311	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17142315	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17142320	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17142326	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17142336	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17278994	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17279126	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17279575	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17279645	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17280552	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17280657	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17345578	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17345704	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17518341	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17518502	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1810339	0.96[ASN][1000 genomes]
rs1851806	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1916859	1.00[ASN][1000 genomes]
rs1916861	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1949781	1.00[ASN][1000 genomes]
rs2049377	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2049381	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2108143	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2140569	1.00[ASN][1000 genomes]
rs2177497	0.96[ASN][1000 genomes]
rs2402490	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2402491	1.00[ASN][1000 genomes]
rs28465102	1.00[ASN][1000 genomes]
rs28843793	0.85[ASN][1000 genomes]
rs28893249	0.85[ASN][1000 genomes]
rs34352135	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34943632	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36054882	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3857835	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4236612	1.00[ASN][1000 genomes]
rs4268068	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4338036	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4342531	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4398835	1.00[ASN][1000 genomes]
rs4486113	0.85[ASN][1000 genomes]
rs4644180	1.00[ASN][1000 genomes]
rs4727897	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4727901	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4727903	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4727904	1.00[ASN][1000 genomes]
rs4730924	0.85[ASN][1000 genomes]
rs4730929	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4730930	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4730933	0.88[ASN][1000 genomes]
rs4730935	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4730936	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4730939	1.00[ASN][1000 genomes]
rs4730940	0.96[ASN][1000 genomes]
rs4730941	1.00[ASN][1000 genomes]
rs4730945	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55897535	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56750874	0.99[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57408882	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57472313	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57622763	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57899966	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57959404	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58141692	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58374970	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58440464	0.81[EUR][1000 genomes]
rs59561401	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59615990	1.00[ASN][1000 genomes]
rs60150709	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60741204	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60866751	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61121232	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62477384	0.92[ASN][1000 genomes]
rs6466707	0.85[ASN][1000 genomes]
rs6466708	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6466713	1.00[ASN][1000 genomes]
rs6466714	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6466717	1.00[ASN][1000 genomes]
rs6943195	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6944331	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6946759	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6947105	1.00[ASN][1000 genomes]
rs6947172	1.00[ASN][1000 genomes]
rs6948585	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6949406	1.00[ASN][1000 genomes]
rs6950247	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6951577	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6955609	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6957872	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6958096	0.85[ASN][1000 genomes]
rs6961307	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6962153	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6962613	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6962888	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6967604	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6971229	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6972621	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6973035	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6975347	0.87[EUR][1000 genomes]
rs6977777	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6978098	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73483305	0.85[ASN][1000 genomes]
rs73485255	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73487162	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73487163	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73720503	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73722420	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73722422	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73722423	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73723012	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73723013	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7777009	0.92[ASN][1000 genomes]
rs7778068	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7779499	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7779886	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7780266	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7782632	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7784543	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7784594	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7789561	1.00[ASN][1000 genomes]
rs7791292	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7793062	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7796017	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7797244	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7798013	1.00[ASN][1000 genomes]
rs7799128	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7799153	0.88[ASN][1000 genomes]
rs7799166	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7803264	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7804447	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7806056	1.00[ASN][1000 genomes]
rs7808597	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7808954	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7810563	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7810698	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7811166	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7811885	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs846420	0.96[ASN][1000 genomes]
rs846421	1.00[ASN][1000 genomes]
rs846424	1.00[ASN][1000 genomes]
rs846428	1.00[ASN][1000 genomes]
rs846431	1.00[ASN][1000 genomes]
rs846437	1.00[ASN][1000 genomes]
rs846438	1.00[ASN][1000 genomes]
rs846439	1.00[ASN][1000 genomes]
rs846441	1.00[ASN][1000 genomes]
rs846444	1.00[ASN][1000 genomes]
rs846445	1.00[ASN][1000 genomes]
rs846448	1.00[ASN][1000 genomes]
rs940412	0.93[ASN][1000 genomes]
rs961361	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9640790	1.00[ASN][1000 genomes]
rs9640791	1.00[ASN][1000 genomes]
rs9692075	0.96[ASN][1000 genomes]
rs9801364	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9801367	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889114	chr7:119206096-119440159	Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv889115	chr7:119270386-119577292	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1029023	chr7:119292763-119606632	Enhancers ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1023813	chr7:119292763-119606803	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv524225	chr7:119293417-119606632	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv1029841	chr7:119299627-119606632	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv1024175	chr7:119299627-119606803	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
8	nsv1018500	chr7:119310497-119532489	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
9	nsv1028812	chr7:119310497-119604904	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	nsv539097	chr7:119310497-119604904	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
11	nsv1033418	chr7:119324894-119600025	Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
12	nsv539098	chr7:119324894-119600025	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
13	nsv608322	chr7:119363703-119467040	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
14	nsv608323	chr7:119363703-119469204	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
15	nsv1024697	chr7:119377777-119426170	Enhancers Weak transcription Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
16	nsv1018731	chr7:119411352-119493951	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
17	nsv1025273	chr7:119412165-119493951	Strong transcription Genic enhancers Weak transcription Enhancers Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119416400-119427400	Weak transcription	K562	blood

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