Variant report

Variant	rs73559817
Chromosome Location	chr9:100061534-100061535
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:100060663..100062228-chr9:100065797..100068572,2	K562	blood:

rs_ID	r²[population]
rs10114464	0.96[EUR][1000 genomes]
rs10116686	0.97[EUR][1000 genomes]
rs10116963	0.97[EUR][1000 genomes]
rs10121540	1.00[EUR][1000 genomes]
rs10123199	1.00[EUR][1000 genomes]
rs10817347	0.92[EUR][1000 genomes]
rs10817369	0.97[EUR][1000 genomes]
rs10981569	1.00[EUR][1000 genomes]
rs11787986	0.97[EUR][1000 genomes]
rs12682916	0.94[EUR][1000 genomes]
rs2290936	1.00[EUR][1000 genomes]
rs28669226	0.97[EUR][1000 genomes]
rs28864177	0.97[EUR][1000 genomes]
rs3747502	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3747505	1.00[EUR][1000 genomes]
rs3747509	1.00[EUR][1000 genomes]
rs4436243	0.97[EUR][1000 genomes]
rs4526475	1.00[EUR][1000 genomes]
rs45498203	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4623562	1.00[EUR][1000 genomes]
rs58100566	0.89[EUR][1000 genomes]
rs60714215	0.93[AMR][1000 genomes]
rs7469441	0.90[EUR][1000 genomes]
rs7849353	1.00[EUR][1000 genomes]
rs7851443	0.89[EUR][1000 genomes]
rs7854563	1.00[EUR][1000 genomes]
rs7855042	0.97[EUR][1000 genomes]
rs7858368	0.89[EUR][1000 genomes]
rs7864190	1.00[EUR][1000 genomes]
rs7872384	0.92[EUR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100046600-100069000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr9:100053600-100062600	Weak transcription	Hela-S3	cervix
3	chr9:100054800-100069000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr9:100054800-100069400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr9:100055000-100069400	Weak transcription	Rectal Smooth Muscle	rectum
6	chr9:100056200-100069200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr9:100056400-100062400	Weak transcription	NHDF-Ad	bronchial
8	chr9:100056400-100064000	Weak transcription	NHLF	lung
9	chr9:100057000-100075000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr9:100057400-100075400	Weak transcription	Dnd41	blood
11	chr9:100057600-100069000	Weak transcription	Brain Hippocampus Middle	brain
12	chr9:100057800-100069000	Weak transcription	Brain Cingulate Gyrus	brain
13	chr9:100058000-100061800	Weak transcription	Brain Substantia Nigra	brain
14	chr9:100058000-100063800	Weak transcription	Thymus	Thymus
15	chr9:100058000-100068600	Weak transcription	Brain Anterior Caudate	brain
16	chr9:100058000-100068800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr9:100058000-100069200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr9:100058200-100062800	Weak transcription	Spleen	Spleen
19	chr9:100058800-100062000	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr9:100060200-100064800	Weak transcription	Brain Angular Gyrus	brain
21	chr9:100060200-100068800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr9:100060200-100069200	Weak transcription	Brain Germinal Matrix	brain
23	chr9:100060200-100071600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr9:100060600-100069200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr9:100061400-100062400	Enhancers	GM12878-XiMat	blood

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