Variant report

Variant	rs7469441
Chromosome Location	chr9:100062725-100062726
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10114464	0.86[EUR][1000 genomes]
rs10116686	0.87[EUR][1000 genomes]
rs10116963	0.87[EUR][1000 genomes]
rs10121540	0.90[EUR][1000 genomes]
rs10123199	0.90[EUR][1000 genomes]
rs10817347	0.82[EUR][1000 genomes]
rs10817369	0.87[EUR][1000 genomes]
rs10981569	0.90[EUR][1000 genomes]
rs11787986	0.87[EUR][1000 genomes]
rs12682916	0.85[EUR][1000 genomes]
rs2290936	0.90[EUR][1000 genomes]
rs28669226	0.87[EUR][1000 genomes]
rs28864177	0.87[EUR][1000 genomes]
rs3747502	0.90[EUR][1000 genomes]
rs3747505	0.90[EUR][1000 genomes]
rs3747509	0.90[EUR][1000 genomes]
rs4436243	0.87[EUR][1000 genomes]
rs4526475	0.90[EUR][1000 genomes]
rs45498203	0.86[EUR][1000 genomes]
rs4623562	0.90[EUR][1000 genomes]
rs73559817	0.90[EUR][1000 genomes]
rs7849353	0.90[EUR][1000 genomes]
rs7854563	0.90[EUR][1000 genomes]
rs7855042	0.87[EUR][1000 genomes]
rs7864190	0.90[EUR][1000 genomes]
rs7872384	0.83[EUR][1000 genomes]

SNP	Gene	Cis/trans	Tissue	Source
rs7469441	RP11-498P14.5	cis	lung	GTEx

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100046600-100069000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr9:100054800-100069000	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr9:100054800-100069400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:100055000-100069400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr9:100056200-100069200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr9:100056400-100064000	Weak transcription	NHLF	lung
7	chr9:100057000-100075000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr9:100057400-100075400	Weak transcription	Dnd41	blood
9	chr9:100057600-100069000	Weak transcription	Brain Hippocampus Middle	brain
10	chr9:100057800-100069000	Weak transcription	Brain Cingulate Gyrus	brain
11	chr9:100058000-100063800	Weak transcription	Thymus	Thymus
12	chr9:100058000-100068600	Weak transcription	Brain Anterior Caudate	brain
13	chr9:100058000-100068800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr9:100058000-100069200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr9:100058200-100062800	Weak transcription	Spleen	Spleen
16	chr9:100060200-100064800	Weak transcription	Brain Angular Gyrus	brain
17	chr9:100060200-100068800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr9:100060200-100069200	Weak transcription	Brain Germinal Matrix	brain
19	chr9:100060200-100071600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr9:100060600-100069200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr9:100062600-100062800	Weak transcription	GM12878-XiMat	blood

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