Variant report

Variant	rs7358036
Chromosome Location	chr10:50421875-50421876
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10159700	1.00[AFR][1000 genomes]
rs10159817	1.00[AFR][1000 genomes]
rs10159822	1.00[AFR][1000 genomes]
rs11101007	0.80[AFR][1000 genomes]
rs11101010	0.89[YRI][hapmap]
rs11101018	0.89[AFR][1000 genomes]
rs11101019	0.84[AFR][1000 genomes]
rs11101046	1.00[AFR][1000 genomes]
rs11101047	0.83[AFR][1000 genomes]
rs11101048	1.00[AFR][1000 genomes]
rs11101052	0.83[AFR][1000 genomes]
rs11101053	1.00[AFR][1000 genomes]
rs11101055	0.83[AFR][1000 genomes]
rs11101059	0.83[AFR][1000 genomes]
rs12243236	1.00[AFR][1000 genomes]
rs12244349	1.00[AFR][1000 genomes]
rs12249572	0.80[AFR][1000 genomes]
rs12258000	1.00[AFR][1000 genomes]
rs12258809	1.00[AFR][1000 genomes]
rs61739968	0.80[AFR][1000 genomes]
rs7358236	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50421200-50422000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:50421400-50422000	Enhancers	Left Ventricle	heart
3	chr10:50421400-50422200	Enhancers	Right Ventricle	heart
4	chr10:50421600-50425000	Weak transcription	K562	blood
5	chr10:50421600-50431400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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