The 2.0 version of rSNPBase

Variant report

Variant rs73617169
Chromosome Location chr6:131249594-131249595
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr6:131222200-131251800 Weak transcription Primary B cells from cord blood blood
3 chr6:131229600-131249600 Weak transcription Osteobl bone
4 chr6:131234000-131250200 Weak transcription Ovary ovary
5 chr6:131234000-131250600 Weak transcription Fetal Stomach stomach
6 chr6:131234600-131250200 Weak transcription Pancreas Pancrea
7 chr6:131234800-131254000 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr6:131234800-131266600 Weak transcription GM12878-XiMat blood
9 chr6:131236400-131254000 Weak transcription H9 Cell Line embryonic stem cell
10 chr6:131238400-131249800 Weak transcription Colon Smooth Muscle Colon
11 chr6:131238400-131250200 Weak transcription Aorta Aorta
12 chr6:131239200-131252600 Weak transcription Dnd41 blood
13 chr6:131240000-131253600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr6:131242200-131249600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr6:131242600-131254800 Weak transcription Fetal Kidney kidney
16 chr6:131242800-131255000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr6:131244200-131250000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:131244200-131279000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:131244800-131249800 Weak transcription HSMMtube muscle
20 chr6:131244800-131255000 Weak transcription Lung lung
21 chr6:131245000-131249600 Weak transcription Brain Hippocampus Middle brain
22 chr6:131245000-131254000 Weak transcription Left Ventricle heart
23 chr6:131245000-131254800 Weak transcription Stomach Smooth Muscle stomach
24 chr6:131245400-131249600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:131245400-131249600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr6:131245400-131253600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:131246200-131249800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:131246200-131252200 Weak transcription Fetal Muscle Trunk muscle
29 chr6:131246200-131254200 Weak transcription Fetal Intestine Large intestine
30 chr6:131246200-131264800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr6:131246600-131249800 Weak transcription HUVEC blood vessel
32 chr6:131246600-131254800 Weak transcription Placenta Placenta
33 chr6:131246800-131251200 Enhancers Brain Angular Gyrus brain
34 chr6:131247000-131249600 Weak transcription Muscle Satellite Cultured Cells --
35 chr6:131247800-131254200 Weak transcription Fetal Intestine Small intestine
36 chr6:131248400-131250000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr6:131248600-131251200 Enhancers Brain Cingulate Gyrus brain
38 chr6:131248800-131249600 Strong transcription Fetal Muscle Leg muscle
39 chr6:131248800-131253800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr6:131248800-131254200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr6:131248800-131255000 Weak transcription H1 Cell Line embryonic stem cell
42 chr6:131249000-131249800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:131249000-131249800 Strong transcription HSMM muscle
44 chr6:131249000-131250000 Weak transcription Brain Anterior Caudate brain
45 chr6:131249000-131250000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr6:131249000-131250800 Enhancers Primary monocytes fromperipheralblood blood
47 chr6:131249000-131251200 Enhancers Rectal Mucosa Donor 31 rectum
48 chr6:131249000-131252600 Weak transcription HepG2 liver
49 chr6:131249000-131254200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr6:131249000-131254800 Weak transcription HMEC breast

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Last update: Aug 31, 2015