Variant report

Variant	rs73700992
Chromosome Location	chr7:70923437-70923438
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:70923018..70925671-chr7:70952208..70954590,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10274606	1.00[AMR][1000 genomes]
rs4299888	1.00[AMR][1000 genomes]
rs4595007	1.00[AMR][1000 genomes]
rs4719126	1.00[AMR][1000 genomes]
rs55744623	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55967920	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56235392	1.00[AMR][1000 genomes]
rs60213385	1.00[AMR][1000 genomes]
rs60410337	1.00[AMR][1000 genomes]
rs61271681	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6415226	1.00[AMR][1000 genomes]
rs6946985	1.00[AMR][1000 genomes]
rs6969742	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700987	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700993	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700994	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700995	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700996	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73702308	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73702309	1.00[AMR][1000 genomes]
rs7779076	1.00[AMR][1000 genomes]
rs7791088	1.00[AMR][1000 genomes]
rs7794396	1.00[AMR][1000 genomes]
rs7802297	1.00[AMR][1000 genomes]
rs7808680	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70905000-70929000	Weak transcription	Right Atrium	heart
2	chr7:70908400-70935200	Weak transcription	Fetal Lung	lung
3	chr7:70916000-70926400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr7:70920000-70925200	Enhancers	H1 Cell Line	embryonic stem cell
5	chr7:70920200-70925200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr7:70920400-70926000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr7:70921600-70925400	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr7:70921600-70927000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr7:70922000-70924600	Enhancers	Fetal Heart	heart
10	chr7:70922200-70924000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr7:70922200-70926000	Enhancers	Fetal Muscle Leg	muscle
12	chr7:70922600-70923800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr7:70922600-70923800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr7:70922600-70923800	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
15	chr7:70922600-70924000	Enhancers	Fetal Brain Male	brain
16	chr7:70922800-70923600	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
17	chr7:70922800-70923600	Flanking Active TSS	Adipose Nuclei	Adipose
18	chr7:70922800-70924600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr7:70923000-70923800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr7:70923000-70923800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
21	chr7:70923000-70924000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr7:70923000-70924000	Enhancers	Left Ventricle	heart
23	chr7:70923000-70924000	Enhancers	Pancreas	Pancrea
24	chr7:70923000-70924200	Enhancers	Fetal Muscle Trunk	muscle
25	chr7:70923200-70923600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
26	chr7:70923200-70924000	Enhancers	Right Ventricle	heart
27	chr7:70923200-70925000	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr7:70923200-70925000	Enhancers	HSMMtube	muscle
29	chr7:70923400-70923800	Enhancers	H9 Cell Line	embryonic stem cell
30	chr7:70923400-70923800	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
31	chr7:70923400-70925000	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr7:70923400-70927000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr7:70923400-70928200	Weak transcription	Ovary	ovary

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