Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10050368	1.00[AMR][1000 genomes]
rs10060646	1.00[AMR][1000 genomes]
rs1457764	1.00[AMR][1000 genomes]
rs1840983	1.00[AMR][1000 genomes]
rs55697384	1.00[AMR][1000 genomes]
rs55914631	1.00[AMR][1000 genomes]
rs55941350	1.00[AMR][1000 genomes]
rs56088944	1.00[AMR][1000 genomes]
rs56247741	1.00[ASN][1000 genomes]
rs57406559	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57975370	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58003154	1.00[AMR][1000 genomes]
rs58263371	1.00[AMR][1000 genomes]
rs58502173	1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs61115935	1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs61223690	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6885839	1.00[AMR][1000 genomes]
rs73782205	1.00[AMR][1000 genomes]
rs73782217	1.00[AMR][1000 genomes]
rs73782220	1.00[AMR][1000 genomes]
rs73782221	1.00[AMR][1000 genomes]
rs73782222	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73782224	1.00[AMR][1000 genomes]
rs73782225	1.00[AMR][1000 genomes]
rs73782229	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs73782233	1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs73782234	1.00[ASN][1000 genomes]
rs73782238	1.00[ASN][1000 genomes]
rs922126	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830451	chr5:113684301-113829833	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv882729	chr5:113743628-114497708	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113756200-113759400	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr5:113756400-113770000	Weak transcription	Fetal Heart	heart
3	chr5:113756600-113770200	Weak transcription	Liver	Liver

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