Variant report

Variant	rs73838686
Chromosome Location	chr3:70062076-70062077
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10510993	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11128144	1.00[ASN][1000 genomes]
rs11128145	1.00[ASN][1000 genomes]
rs11128146	1.00[ASN][1000 genomes]
rs11128147	1.00[ASN][1000 genomes]
rs11128149	1.00[ASN][1000 genomes]
rs11128150	1.00[ASN][1000 genomes]
rs11128151	1.00[ASN][1000 genomes]
rs12106831	1.00[ASN][1000 genomes]
rs12106842	1.00[ASN][1000 genomes]
rs12106907	1.00[ASN][1000 genomes]
rs12106913	1.00[ASN][1000 genomes]
rs12106915	1.00[ASN][1000 genomes]
rs12107208	1.00[ASN][1000 genomes]
rs12107258	1.00[ASN][1000 genomes]
rs12107267	1.00[ASN][1000 genomes]
rs12107403	1.00[ASN][1000 genomes]
rs12107405	1.00[ASN][1000 genomes]
rs12107409	1.00[ASN][1000 genomes]
rs12107473	1.00[ASN][1000 genomes]
rs12107744	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12108172	1.00[ASN][1000 genomes]
rs12108174	1.00[ASN][1000 genomes]
rs1532199	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17006565	1.00[ASN][1000 genomes]
rs17006578	1.00[ASN][1000 genomes]
rs17006580	1.00[ASN][1000 genomes]
rs17006582	1.00[ASN][1000 genomes]
rs17006587	1.00[ASN][1000 genomes]
rs17006593	1.00[ASN][1000 genomes]
rs17006595	1.00[ASN][1000 genomes]
rs17006597	1.00[ASN][1000 genomes]
rs17006601	1.00[ASN][1000 genomes]
rs17006609	1.00[ASN][1000 genomes]
rs61479859	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs724794	1.00[ASN][1000 genomes]
rs9310177	1.00[ASN][1000 genomes]
rs9840417	1.00[ASN][1000 genomes]
rs9843596	1.00[ASN][1000 genomes]
rs9917686	1.00[ASN][1000 genomes]
rs9917798	1.00[ASN][1000 genomes]
rs9941978	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533396	chr3:69964029-70538306	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	esv3507809	chr3:70058262-70066160	Weak transcription Enhancers Active TSS	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv3507810	chr3:70058712-70066010	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv3507811	chr3:70058712-70066010	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:70061600-70063200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr3:70061800-70062600	Weak transcription	Aorta	Aorta
3	chr3:70062000-70063200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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