Variant report

Variant	rs73843051
Chromosome Location	chr3:82037634-82037635
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs56234756	0.94[AFR][1000 genomes]
rs56265350	0.94[AFR][1000 genomes]
rs58147634	0.94[AFR][1000 genomes]
rs58266245	0.94[AFR][1000 genomes]
rs59175114	0.94[AFR][1000 genomes]
rs60361198	0.83[AFR][1000 genomes]
rs60454714	0.94[AFR][1000 genomes]
rs61368572	0.94[AFR][1000 genomes]
rs73841289	0.94[AFR][1000 genomes]
rs73841290	0.94[AFR][1000 genomes]
rs73841291	0.94[AFR][1000 genomes]
rs73841295	0.94[AFR][1000 genomes]
rs73841296	0.94[AFR][1000 genomes]
rs73841297	0.94[AFR][1000 genomes]
rs73841299	0.94[AFR][1000 genomes]
rs73841521	0.83[AFR][1000 genomes]
rs73841522	0.94[AFR][1000 genomes]
rs73841524	0.94[AFR][1000 genomes]
rs73841526	0.94[AFR][1000 genomes]
rs73841527	0.94[AFR][1000 genomes]
rs73841528	0.94[AFR][1000 genomes]
rs73843052	0.94[AFR][1000 genomes]
rs73843053	0.94[AFR][1000 genomes]
rs73843055	0.94[AFR][1000 genomes]
rs73843056	0.94[AFR][1000 genomes]
rs73843059	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752870	chr3:82014410-82050310	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:82031000-82038200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:82037200-82038600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr3:82037200-82039400	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr3:82037400-82038400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr3:82037400-82039600	Weak transcription	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links