Variant report

Variant	rs73843632
Chromosome Location	chr3:85534151-85534152
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:85510932..85513927-chr3:85533761..85535530,2	K562	blood:
2	chr3:85528291..85540418-chr3:85548148..85554862,16	K562	blood:
3	chr3:85534090..85536047-chr3:85539153..85540993,2	K562	blood:
4	chr3:85527157..85529788-chr3:85532322..85535724,4	K562	blood:

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs55747506	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55869020	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56375545	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57803625	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58822298	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59749337	1.00[AMR][1000 genomes]
rs60667710	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843608	1.00[AMR][1000 genomes]
rs73843625	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843628	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843629	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843659	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843661	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843662	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843680	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843682	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843686	1.00[AMR][1000 genomes]
rs73843689	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73843696	0.83[AFR][1000 genomes]
rs73845433	1.00[AMR][1000 genomes]
rs73845447	1.00[AMR][1000 genomes]
rs73845471	1.00[AMR][1000 genomes]
rs73845473	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73845474	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73845476	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73845484	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73845485	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73845488	0.83[AFR][1000 genomes]
rs73845605	1.00[AMR][1000 genomes]
rs73845610	1.00[AMR][1000 genomes]
rs73845611	1.00[AMR][1000 genomes]
rs9810831	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3419993	chr3:85030343-85663403	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
2	esv2753915	chr3:85071410-85624810	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1002238	chr3:85357855-85719373	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	diseases
4	nsv536619	chr3:85357855-85719373	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	diseases
5	nsv590904	chr3:85438564-85551403	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv590905	chr3:85438564-85797093	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv998829	chr3:85449960-85641099	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv536622	chr3:85449960-85641099	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv526621	chr3:85470642-85667683	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv1013601	chr3:85489536-85570465	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
11	nsv536624	chr3:85489536-85570465	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
12	nsv1009927	chr3:85497666-85669155	Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv1010541	chr3:85505839-85870597	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
14	nsv536625	chr3:85505839-85870597	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
15	esv2762338	chr3:85520915-85577233	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
16	nsv1009804	chr3:85521984-85581386	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
17	nsv536626	chr3:85527837-85578368	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:85519200-85536800	Weak transcription	Fetal Brain Male	brain
2	chr3:85531000-85534600	Weak transcription	HSMM	muscle
3	chr3:85533600-85534400	Weak transcription	Osteobl	bone
4	chr3:85534000-85535400	Enhancers	Muscle Satellite Cultured Cells	--

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