Variant report
Variant | rs73894727 |
---|---|
Chromosome Location | chr21:17412111-17412112 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11088561 | 0.82[ASN][1000 genomes] |
rs12482831 | 0.84[ASN][1000 genomes] |
rs12483563 | 0.86[ASN][1000 genomes] |
rs12483594 | 0.86[ASN][1000 genomes] |
rs12483611 | 0.86[ASN][1000 genomes] |
rs12626424 | 0.87[ASN][1000 genomes] |
rs13049528 | 0.87[ASN][1000 genomes] |
rs1893382 | 0.86[ASN][1000 genomes] |
rs1893383 | 0.86[ASN][1000 genomes] |
rs2000700 | 0.90[ASN][1000 genomes] |
rs2823545 | 0.82[ASN][1000 genomes] |
rs2823549 | 0.86[ASN][1000 genomes] |
rs2823550 | 0.86[ASN][1000 genomes] |
rs2823570 | 0.86[ASN][1000 genomes] |
rs2823571 | 0.86[ASN][1000 genomes] |
rs2823572 | 0.86[ASN][1000 genomes] |
rs2823573 | 0.86[ASN][1000 genomes] |
rs2823574 | 0.87[ASN][1000 genomes] |
rs2823576 | 0.87[ASN][1000 genomes] |
rs2823577 | 0.97[ASN][1000 genomes] |
rs2823578 | 0.97[ASN][1000 genomes] |
rs457319 | 0.86[ASN][1000 genomes] |
rs459355 | 0.86[ASN][1000 genomes] |
rs56037345 | 0.83[ASN][1000 genomes] |
rs56110468 | 0.86[ASN][1000 genomes] |
rs6517682 | 0.86[ASN][1000 genomes] |
rs7277086 | 0.85[ASN][1000 genomes] |
rs7279935 | 0.81[ASN][1000 genomes] |
rs7281157 | 0.87[ASN][1000 genomes] |
rs73894724 | 0.90[ASN][1000 genomes] |
rs8126662 | 0.86[ASN][1000 genomes] |
rs9979920 | 0.84[ASN][1000 genomes] |
rs9984915 | 0.81[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv913414 | chr21:17383785-17459507 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | nsv913415 | chr21:17400916-17452276 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
3 | esv2830060 | chr21:17400916-17459507 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
4 | nsv527854 | chr21:17400916-17459507 | Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr21:17411000-17412200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |