Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1011104	1.00[EUR][1000 genomes]
rs12624513	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1999861	1.00[EUR][1000 genomes]
rs55798356	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56036654	1.00[EUR][1000 genomes]
rs56182009	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56209167	1.00[EUR][1000 genomes]
rs56352832	1.00[EUR][1000 genomes]
rs56382661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58729254	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59348182	1.00[EUR][1000 genomes]
rs60548615	1.00[EUR][1000 genomes]
rs61118904	1.00[EUR][1000 genomes]
rs72470562	1.00[EUR][1000 genomes]
rs73608964	1.00[EUR][1000 genomes]
rs73608965	1.00[EUR][1000 genomes]
rs73608966	1.00[EUR][1000 genomes]
rs73900487	1.00[EUR][1000 genomes]
rs73900489	1.00[EUR][1000 genomes]
rs73900492	1.00[EUR][1000 genomes]
rs73900495	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73900496	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73902804	1.00[EUR][1000 genomes]
rs73902805	1.00[EUR][1000 genomes]
rs872009	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3377156	chr20:22466914-22469565	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
2	esv3454562	chr20:22466923-22469556	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
3	esv3454563	chr20:22466923-22469556	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22465400-22469800	Weak transcription	HepG2	liver
2	chr20:22465400-22470000	Weak transcription	Liver	Liver
3	chr20:22465400-22470200	Weak transcription	Duodenum Mucosa	Duodenum
4	chr20:22465400-22470200	Weak transcription	Pancreas	Pancrea
5	chr20:22465400-22470200	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr20:22466000-22469400	Weak transcription	Stomach Mucosa	stomach

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