Variant report

Variant	rs59348182
Chromosome Location	chr20:22450253-22450254
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:22433147..22434679-chr20:22450224..22451820,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1011104	1.00[EUR][1000 genomes]
rs12624513	1.00[EUR][1000 genomes]
rs1999861	1.00[EUR][1000 genomes]
rs34555951	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs55798356	1.00[EUR][1000 genomes]
rs56036654	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56182009	1.00[EUR][1000 genomes]
rs56209167	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56352832	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs56382661	1.00[EUR][1000 genomes]
rs58729254	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60548615	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61118904	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72470562	1.00[EUR][1000 genomes]
rs73608964	1.00[EUR][1000 genomes]
rs73608965	1.00[EUR][1000 genomes]
rs73608966	1.00[EUR][1000 genomes]
rs73900487	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73900489	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73900490	1.00[ASN][1000 genomes]
rs73900492	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73900495	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73900496	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73900500	1.00[EUR][1000 genomes]
rs73902804	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73902805	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs872009	1.00[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22446400-22451600	Weak transcription	Gastric	stomach
2	chr20:22447000-22450800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr20:22448200-22450400	Weak transcription	Liver	Liver
4	chr20:22448200-22452000	Weak transcription	Pancreas	Pancrea
5	chr20:22448200-22452000	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr20:22448400-22451400	Enhancers	HepG2	liver
7	chr20:22449400-22450400	Enhancers	Stomach Mucosa	stomach
8	chr20:22449400-22450800	Enhancers	A549	lung
9	chr20:22450000-22452200	Weak transcription	K562	blood

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