Variant report

Variant rs73936430
Chromosome Location chr19:53344674-53344675
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53333600-53345000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:53338800-53349200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr19:53338800-53352000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr19:53338800-53355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:53339000-53345800 Strong transcription Placenta Placenta
6 chr19:53339000-53357600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr19:53339000-53357800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
8 chr19:53339000-53359200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
9 chr19:53339200-53350600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
10 chr19:53339400-53348200 ZNF genes & repeats Adipose Nuclei Adipose
11 chr19:53339600-53348600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
12 chr19:53339600-53351600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
13 chr19:53340400-53350200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr19:53340600-53348000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
15 chr19:53340600-53348400 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr19:53340600-53349200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
17 chr19:53340600-53349800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
18 chr19:53340600-53350200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr19:53340600-53355000 ZNF genes & repeats Duodenum Mucosa Duodenum
20 chr19:53340800-53347800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
21 chr19:53340800-53348000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:53340800-53349800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:53340800-53350400 Strong transcription Dnd41 blood
24 chr19:53340800-53352000 Strong transcription Fetal Brain Female brain
25 chr19:53340800-53355000 ZNF genes & repeats Primary hematopoietic stem cells blood
26 chr19:53340800-53355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:53340800-53357400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
28 chr19:53340800-53357800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
29 chr19:53341200-53352000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
30 chr19:53341200-53353800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr19:53341400-53352200 ZNF genes & repeats Primary B cells from cord blood blood
32 chr19:53342000-53346200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
33 chr19:53342000-53346200 ZNF genes & repeats Osteobl bone
34 chr19:53342000-53350400 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
35 chr19:53342000-53352400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
36 chr19:53342000-53353000 ZNF genes & repeats Primary T cells from cord blood blood
37 chr19:53342200-53345400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr19:53342200-53345400 Strong transcription Brain Germinal Matrix brain
39 chr19:53342200-53346200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
40 chr19:53342200-53346400 ZNF genes & repeats Rectal Smooth Muscle rectum
41 chr19:53342200-53348600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr19:53342200-53349200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
43 chr19:53342200-53349200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
44 chr19:53342200-53351400 ZNF genes & repeats Aorta Aorta
45 chr19:53342200-53353200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
46 chr19:53342200-53355000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
47 chr19:53342200-53357600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr19:53342400-53345400 ZNF genes & repeats Right Ventricle heart
49 chr19:53342400-53346400 ZNF genes & repeats H1 Cell Line embryonic stem cell
50 chr19:53342400-53346400 ZNF genes & repeats Fetal Muscle Leg muscle

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