Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:173764454..173767281-chr2:173769134..173770685,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs3754760	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3754761	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3754762	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3754763	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3769265	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3769268	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3769277	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3769278	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3769280	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3769281	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3769291	0.87[EUR][1000 genomes]
rs3769294	0.87[EUR][1000 genomes]
rs55759167	1.00[EUR][1000 genomes]
rs55923901	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56884890	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57440334	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs59080171	0.87[EUR][1000 genomes]
rs73977720	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73977722	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73977726	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73977729	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533927	chr2:173161637-173796894	Active TSS Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
2	nsv834459	chr2:173735192-173926750	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:173759000-173770600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr2:173762200-173765800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr2:173764400-173771200	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr2:173764400-173792600	Weak transcription	Fetal Intestine Small	intestine
5	chr2:173764800-173766400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr2:173764800-173769400	Weak transcription	Right Atrium	heart
7	chr2:173764800-173769600	Weak transcription	Left Ventricle	heart
8	chr2:173764800-173776000	Weak transcription	Spleen	Spleen
9	chr2:173765000-173766600	Weak transcription	Lung	lung

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