The 2.0 version of rSNPBase

Variant report

Variant rs74124262
Chromosome Location chr1:172597140-172597141
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172589600-172598600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172594800-172597200 Enhancers Placenta Amnion Placenta Amnion
3 chr1:172595200-172598800 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr1:172595400-172598600 Weak transcription Primary monocytes fromperipheralblood blood
5 chr1:172595800-172597800 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr1:172596000-172597600 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr1:172596000-172598200 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr1:172596000-172600400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr1:172596200-172597600 Enhancers Primary T helper cells fromperipheralblood blood
10 chr1:172596200-172598200 Enhancers Primary T cells fromperipheralblood blood
11 chr1:172596200-172600800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:172596400-172597400 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr1:172596400-172597600 Enhancers Primary T cells from cord blood blood
14 chr1:172596400-172598400 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr1:172596600-172597200 Enhancers HepG2 liver
16 chr1:172596600-172597600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:172596600-172598000 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr1:172596600-172598200 Enhancers Dnd41 blood
19 chr1:172597000-172597200 Enhancers Fetal Thymus thymus
20 chr1:172597000-172597400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr1:172597000-172597400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr1:172597000-172597400 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr1:172597000-172597400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015