The 2.0 version of rSNPBase

Variant report

Variant rs73034011
Chromosome Location chr1:172526709-172526710
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172503400-172528600 Weak transcription Aorta Aorta
2 chr1:172503400-172528600 Weak transcription Lung lung
3 chr1:172503600-172531600 Weak transcription Esophagus oesophagus
4 chr1:172503800-172529000 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:172503800-172534200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:172504200-172527000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:172506000-172532600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:172506200-172528400 Weak transcription Fetal Stomach stomach
9 chr1:172507400-172528600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:172509400-172530800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:172511800-172528600 Weak transcription Stomach Smooth Muscle stomach
12 chr1:172511800-172557800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:172512000-172529000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:172512000-172534200 Weak transcription Gastric stomach
15 chr1:172514200-172558800 Weak transcription Small Intestine intestine
16 chr1:172514800-172528600 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:172514800-172530200 Weak transcription Thymus Thymus
18 chr1:172515200-172528000 Weak transcription Rectal Smooth Muscle rectum
19 chr1:172515200-172528200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:172515400-172528600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:172516000-172532800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:172516200-172528800 Weak transcription Pancreas Pancrea
23 chr1:172516400-172527400 Weak transcription NHLF lung
24 chr1:172516600-172528800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:172516800-172550200 Weak transcription Fetal Heart heart
26 chr1:172517800-172527200 Weak transcription Fetal Kidney kidney
27 chr1:172518000-172529000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:172518600-172533000 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:172519000-172530000 Weak transcription NH-A brain
30 chr1:172519000-172530200 Weak transcription Brain Substantia Nigra brain
31 chr1:172519200-172526800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr1:172519200-172526800 Weak transcription A549 lung
33 chr1:172519200-172527200 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:172519200-172528000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:172519200-172529000 Weak transcription Brain Germinal Matrix brain
36 chr1:172519200-172534600 Weak transcription Right Ventricle heart
37 chr1:172519200-172559000 Weak transcription Psoas Muscle Psoas
38 chr1:172519400-172527600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:172519400-172529000 Weak transcription NHEK skin
40 chr1:172519400-172533000 Weak transcription HUVEC blood vessel
41 chr1:172519400-172534600 Weak transcription Colon Smooth Muscle Colon
42 chr1:172519400-172535400 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr1:172519400-172571600 Weak transcription Brain Angular Gyrus brain
44 chr1:172519600-172527400 Weak transcription Fetal Lung lung
45 chr1:172519600-172527400 Weak transcription Stomach Mucosa stomach
46 chr1:172519600-172528200 Weak transcription GM12878-XiMat blood
47 chr1:172519600-172528800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr1:172519600-172533000 Weak transcription Brain Cingulate Gyrus brain
49 chr1:172519600-172533200 Weak transcription Brain Anterior Caudate brain
50 chr1:172519600-172538000 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015