The 2.0 version of rSNPBase

Variant report

Variant rs74132952
Chromosome Location chr1:185535532-185535533
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185525400-185536000 Weak transcription Stomach Mucosa stomach
2 chr1:185528000-185536000 Weak transcription Fetal Kidney kidney
3 chr1:185528600-185539800 Enhancers Primary T helper 17 cells PMA-I stimulated --
4 chr1:185529400-185543000 Weak transcription Pancreas Pancrea
5 chr1:185529600-185535800 Weak transcription Fetal Intestine Large intestine
6 chr1:185530400-185536000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:185530800-185535800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr1:185530800-185536600 Weak transcription Left Ventricle heart
9 chr1:185530800-185544000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:185531000-185535800 Weak transcription Primary monocytes fromperipheralblood blood
11 chr1:185531200-185536000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:185531800-185540400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:185532200-185536200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:185532800-185538800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:185533000-185535800 Enhancers Primary T cells fromperipheralblood blood
16 chr1:185533000-185538800 Enhancers HMEC breast
17 chr1:185533000-185540200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:185533000-185540800 Enhancers NHEK skin
19 chr1:185533200-185535800 Enhancers Primary T helper cells PMA-I stimulated --
20 chr1:185533200-185536000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:185533400-185536000 Enhancers Primary T cells from cord blood blood
22 chr1:185533400-185539000 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr1:185533600-185536000 Enhancers Primary T helper cells fromperipheralblood blood
24 chr1:185533600-185536400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:185533800-185536400 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr1:185534000-185536000 Enhancers Thymus Thymus
27 chr1:185534000-185537000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:185534000-185537200 Enhancers Fetal Heart heart
29 chr1:185534200-185537800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:185534200-185540000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:185534400-185536000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:185534400-185536000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:185534400-185536200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr1:185534400-185536400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr1:185534400-185538800 Enhancers Primary hematopoietic stem cells blood
36 chr1:185534600-185535800 Enhancers Fetal Thymus thymus
37 chr1:185534600-185536000 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr1:185534600-185538600 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:185534600-185540200 Enhancers Primary neutrophils fromperipheralblood blood
40 chr1:185534800-185535800 Enhancers Primary T regulatory cells fromperipheralblood blood
41 chr1:185534800-185536000 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:185534800-185536200 Weak transcription Placenta Amnion Placenta Amnion
43 chr1:185534800-185536200 Weak transcription Osteobl bone
44 chr1:185534800-185536600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:185534800-185539200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:185534800-185543000 Weak transcription A549 lung
47 chr1:185535000-185536000 Enhancers Primary B cells from cord blood blood
48 chr1:185535000-185536000 Weak transcription NH-A brain
49 chr1:185535000-185543400 Weak transcription HSMMtube muscle
50 chr1:185535200-185538200 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015