The 2.0 version of rSNPBase

Variant report

Variant rs7580127
Chromosome Location chr2:37382754-37382755
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37312200-37383200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:37336400-37383200 Weak transcription Psoas Muscle Psoas
3 chr2:37355000-37383200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr2:37361800-37383200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:37365800-37383600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr2:37371200-37383200 Weak transcription Colonic Mucosa Colon
7 chr2:37372200-37383200 Weak transcription Gastric stomach
8 chr2:37372600-37383200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr2:37374400-37383200 Weak transcription NH-A brain
10 chr2:37375000-37382800 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr2:37375000-37383200 Weak transcription H9 Cell Line embryonic stem cell
12 chr2:37375200-37383000 Weak transcription Thymus Thymus
13 chr2:37375800-37383000 Weak transcription HSMMtube muscle
14 chr2:37375800-37383200 Weak transcription Lung lung
15 chr2:37376400-37382800 Weak transcription Fetal Muscle Trunk muscle
16 chr2:37376400-37383000 Weak transcription Aorta Aorta
17 chr2:37376400-37383000 Weak transcription Placenta Placenta
18 chr2:37377000-37383000 Weak transcription Pancreas Pancrea
19 chr2:37377200-37383000 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr2:37377200-37383000 Weak transcription HSMM muscle
21 chr2:37377200-37383200 Weak transcription H1 Cell Line embryonic stem cell
22 chr2:37378600-37383000 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr2:37378800-37383000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr2:37379800-37383200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr2:37380600-37383200 Weak transcription Ovary ovary
26 chr2:37381000-37383000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr2:37381200-37382800 Weak transcription Fetal Brain Male brain
28 chr2:37381200-37383200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:37381200-37383200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr2:37381600-37383200 Enhancers Primary B cells from peripheral blood blood
31 chr2:37381600-37383200 Enhancers Primary T cells fromperipheralblood blood
32 chr2:37382000-37382800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:37382000-37382800 Flanking Active TSS GM12878-XiMat blood
34 chr2:37382000-37383000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr2:37382000-37383000 Enhancers Right Ventricle heart
36 chr2:37382000-37383200 Enhancers Primary monocytes fromperipheralblood blood
37 chr2:37382000-37383200 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr2:37382000-37383200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr2:37382200-37382800 Enhancers Brain Germinal Matrix brain
40 chr2:37382200-37382800 Genic enhancers Fetal Muscle Leg muscle
41 chr2:37382200-37382800 Flanking Active TSS Hela-S3 cervix
42 chr2:37382200-37382800 Enhancers HepG2 liver
43 chr2:37382200-37382800 Enhancers Monocytes-CD14+_RO01746 blood
44 chr2:37382200-37383000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:37382200-37383000 Enhancers Primary T helper cells PMA-I stimulated --
46 chr2:37382200-37383000 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr2:37382200-37383000 Enhancers Primary mononuclear cells fromperipheralblood Blood
48 chr2:37382200-37383000 Enhancers Brain Inferior Temporal Lobe brain
49 chr2:37382200-37383000 Enhancers Colon Smooth Muscle Colon
50 chr2:37382200-37383000 Enhancers Fetal Brain Female brain

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Last update: Aug 31, 2015