Variant report

Variant	rs7631987
Chromosome Location	chr3:150512678-150512679
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16862846	0.95[ASN][1000 genomes]
rs3773613	0.95[ASN][1000 genomes]
rs6793624	1.00[AMR][1000 genomes]
rs73003798	0.87[AMR][1000 genomes]
rs73010978	1.00[ASN][1000 genomes]
rs7621184	0.87[AMR][1000 genomes]
rs7624442	0.87[AMR][1000 genomes]
rs7643407	0.87[AMR][1000 genomes]
rs7651357	0.87[AMR][1000 genomes]
rs7652779	0.87[AMR][1000 genomes]
rs935223	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532662	chr3:150180747-150633414	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150509800-150518400	Weak transcription	Aorta	Aorta
2	chr3:150511600-150518800	Enhancers	Placenta	Placenta
3	chr3:150511800-150512800	Enhancers	HSMMtube	muscle
4	chr3:150512200-150516000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr3:150512600-150515600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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