Variant report

Variant	rs7749701
Chromosome Location	chr6:134451226-134451227
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:134439720..134441669-chr6:134451006..134453817,2	MCF-7	breast:

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs11961400	0.95[ASN][1000 genomes]
rs11961417	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11963187	0.95[ASN][1000 genomes]
rs11964465	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11968128	0.95[ASN][1000 genomes]
rs11968888	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11968897	0.95[ASN][1000 genomes]
rs11968916	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11970500	0.95[ASN][1000 genomes]
rs11970523	0.95[ASN][1000 genomes]
rs17063379	0.90[ASN][1000 genomes]
rs17063385	0.95[ASN][1000 genomes]
rs17063388	0.95[ASN][1000 genomes]
rs17063395	0.95[ASN][1000 genomes]
rs4429965	0.95[ASN][1000 genomes]
rs4429966	0.95[ASN][1000 genomes]
rs55649880	0.90[ASN][1000 genomes]
rs55756731	0.90[ASN][1000 genomes]
rs55978141	0.95[ASN][1000 genomes]
rs56068977	0.95[ASN][1000 genomes]
rs56104368	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs56117836	0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs56163055	0.95[ASN][1000 genomes]
rs56196039	0.90[ASN][1000 genomes]
rs56221261	0.90[ASN][1000 genomes]
rs56311826	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs56352446	0.90[ASN][1000 genomes]
rs56393138	0.95[ASN][1000 genomes]
rs56935348	0.90[ASN][1000 genomes]
rs58486630	0.95[ASN][1000 genomes]
rs58831076	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs59829206	0.95[ASN][1000 genomes]
rs60289345	0.95[ASN][1000 genomes]
rs60762745	0.84[ASN][1000 genomes]
rs61211919	0.84[ASN][1000 genomes]
rs73556750	0.84[ASN][1000 genomes]
rs73556753	0.84[ASN][1000 genomes]
rs73556759	0.84[ASN][1000 genomes]
rs73556761	0.84[ASN][1000 genomes]
rs73556763	0.84[ASN][1000 genomes]
rs73556765	0.84[ASN][1000 genomes]
rs73556771	0.90[ASN][1000 genomes]
rs73556773	0.90[ASN][1000 genomes]
rs73556781	0.95[ASN][1000 genomes]
rs73556782	0.95[ASN][1000 genomes]
rs73556797	0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73558605	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73558613	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73558620	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73558622	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73558625	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73558626	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7767616	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134439000-134453600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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