Variant report

Variant	rs7752761
Chromosome Location	chr6:24310313-24310314
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10806987	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1087289	0.82[EUR][1000 genomes]
rs10946690	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1340695	0.90[ASN][1000 genomes]
rs2185599	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3846829	0.82[ASN][1000 genomes]
rs3846831	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3846832	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3857542	0.92[ASN][1000 genomes]
rs3895346	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4712818	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7770593	0.95[ASN][1000 genomes]
rs793836	0.81[EUR][1000 genomes]
rs793838	0.81[EUR][1000 genomes]
rs793841	0.81[EUR][1000 genomes]
rs793842	0.81[EUR][1000 genomes]
rs793858	0.80[EUR][1000 genomes]
rs9295619	0.82[EUR][1000 genomes]
rs9393540	0.84[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24294600-24312000	Weak transcription	Fetal Intestine Small	intestine
2	chr6:24308400-24313600	Weak transcription	Fetal Kidney	kidney
3	chr6:24308400-24313800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:24308600-24311000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr6:24308600-24311200	Weak transcription	HSMMtube	muscle
6	chr6:24308600-24311800	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr6:24309400-24310800	Weak transcription	HepG2	liver
8	chr6:24309800-24312800	Enhancers	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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