Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:127031399..127034286-chr7:127153257..127155802,2	K562	blood:
2	chr7:127148053..127150830-chr7:127152536..127155172,4	K562	blood:

Variant related genes	Relation type
ENSG00000048405	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10085369	0.92[EUR][1000 genomes]
rs10230430	0.92[EUR][1000 genomes]
rs10237869	0.92[EUR][1000 genomes]
rs10238433	0.80[EUR][1000 genomes]
rs10258030	0.89[EUR][1000 genomes]
rs10263237	0.80[EUR][1000 genomes]
rs10267162	0.92[EUR][1000 genomes]
rs10276292	0.89[EUR][1000 genomes]
rs1107491	1.00[GIH][hapmap];0.85[MEX][hapmap];0.97[EUR][1000 genomes]
rs11763731	0.92[EUR][1000 genomes]
rs17151018	0.89[EUR][1000 genomes]
rs28393048	0.97[EUR][1000 genomes]
rs28807149	0.89[EUR][1000 genomes]
rs56406547	0.86[EUR][1000 genomes]
rs61667750	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6467139	0.89[EUR][1000 genomes]
rs6973507	0.92[EUR][1000 genomes]
rs6977152	0.89[EUR][1000 genomes]
rs73459063	0.85[EUR][1000 genomes]
rs73459083	0.89[EUR][1000 genomes]
rs7777815	0.87[EUR][1000 genomes]
rs7778682	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs7781622	0.80[EUR][1000 genomes]
rs7784284	0.91[AFR][1000 genomes]
rs7784533	0.89[EUR][1000 genomes]
rs7811205	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831122	chr7:127143207-127357885	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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